RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 LSM7Q9UK45 103 aaKnown RBP2.54□□□□□ -2
CLK1-213ENST00000492793 RAB26Q9ULW5 256 aa2.54□□□□□ -2
CLK1-213ENST00000492793 CSDC2Q9Y534 153 aaKnown RBP2.54□□□□□ -2
CLK1-213ENST00000492793 F11RQ9Y624 299 aaKnown RBP2.54□□□□□ -2
CLK1-213ENST00000492793 PCM1Q15154 2024 aa2.54□□□□□ -2
CLK1-213ENST00000492793 CNTNAP1P78357 1384 aa2.53□□□□□ -2
CLK1-213ENST00000492793 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.53□□□□□ -2
CLK1-213ENST00000492793 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.53□□□□□ -2
CLK1-213ENST00000492793 A0A096LNJ9 63 aa2.53□□□□□ -2
CLK1-213ENST00000492793 CDC7O00311 574 aa2.53□□□□□ -2
CLK1-213ENST00000492793 EEDO75530 441 aaKnown RBP2.53□□□□□ -2
CLK1-213ENST00000492793 MED6O75586 246 aa2.53□□□□□ -2
CLK1-213ENST00000492793 CT62P0C5K7 136 aa2.53□□□□□ -2
CLK1-213ENST00000492793 ZDHHC11BP0C7U3 371 aa2.53□□□□□ -2
CLK1-213ENST00000492793 SMIM10L1P0DMW3 83 aa2.53□□□□□ -2
CLK1-213ENST00000492793 PRPS2P11908 318 aa2.53□□□□□ -2
CLK1-213ENST00000492793 ZNF32P17041 273 aa2.53□□□□□ -2
CLK1-213ENST00000492793 TFPI2P48307 235 aa2.53□□□□□ -2
CLK1-213ENST00000492793 ZNF136P52737 540 aa2.53□□□□□ -2
CLK1-213ENST00000492793 ACLYP53396 1101 aa2.53□□□□□ -2
CLK1-213ENST00000492793 GPX6P59796 221 aa2.53□□□□□ -2
CLK1-213ENST00000492793 RSPO1Q2MKA7 263 aaPredicted RBP2.53□□□□□ -2
CLK1-213ENST00000492793 CCNJQ5T5M9 372 aa2.53□□□□□ -2
CLK1-213ENST00000492793 HES5Q5TA89 166 aa2.53□□□□□ -2
CLK1-213ENST00000492793 ZFP2Q6ZN57 461 aa2.53□□□□□ -2
CLK1-213ENST00000492793 ZNF493Q6ZR52 646 aa2.53□□□□□ -2
CLK1-213ENST00000492793 NCCRP1Q6ZVX7 275 aaPredicted RBP2.53□□□□□ -2
CLK1-213ENST00000492793 PCP2Q8IVA1 136 aa2.53□□□□□ -2
CLK1-213ENST00000492793 PDIK1LQ8N165 341 aa2.53□□□□□ -2
CLK1-213ENST00000492793 MS4A15Q8N5U1 240 aa2.53□□□□□ -2
CLK1-213ENST00000492793 OR1S2Q8NGQ3 325 aa2.53□□□□□ -2
CLK1-213ENST00000492793 OR5B3Q8NH48 314 aa2.53□□□□□ -2
CLK1-213ENST00000492793 ZNF502Q8TBZ5 544 aa2.53□□□□□ -2
CLK1-213ENST00000492793 GPR151Q8TDV0 419 aa2.53□□□□□ -2
CLK1-213ENST00000492793 STARD8Q92502 1023 aa2.53□□□□□ -2
CLK1-213ENST00000492793 KIFAP3Q92845 792 aa2.53□□□□□ -2
CLK1-213ENST00000492793 EXOSC8Q96B26 276 aaKnown RBP2.53□□□□□ -2
CLK1-213ENST00000492793 FAM3DQ96BQ1 224 aa2.53□□□□□ -2
CLK1-213ENST00000492793 RASD2Q96D21 266 aa2.53□□□□□ -2
CLK1-213ENST00000492793 PIK3IP1Q96FE7 263 aa2.53□□□□□ -2
CLK1-213ENST00000492793 SMIM10Q96HG1 83 aa2.53□□□□□ -2
CLK1-213ENST00000492793 TSNARE1Q96NA8 513 aa2.53□□□□□ -2
CLK1-213ENST00000492793 SH3GL3Q99963 347 aa2.53□□□□□ -2
CLK1-213ENST00000492793 TPK1Q9H3S4 243 aa2.53□□□□□ -2
CLK1-213ENST00000492793 PATZ1Q9HBE1 687 aaKnown RBP2.53□□□□□ -2
CLK1-213ENST00000492793 MYOZ2Q9NPC6 264 aa2.53□□□□□ -2
CLK1-213ENST00000492793 RBAKQ9NYW8 714 aaPredicted RBP2.53□□□□□ -2
CLK1-213ENST00000492793 OR12D3Q9UGF7 316 aa2.53□□□□□ -2
CLK1-213ENST00000492793 CD84Q9UIB8 345 aa2.53□□□□□ -2
CLK1-213ENST00000492793 ING4Q9UNL4 249 aa2.53□□□□□ -2
CLK1-213ENST00000492793 PSG11Q9UQ72 335 aa2.53□□□□□ -2
CLK1-213ENST00000492793 GOLT1BQ9Y3E0 138 aa2.53□□□□□ -2
CLK1-213ENST00000492793 MRPS18BQ9Y676 258 aaKnown RBP2.53□□□□□ -2
CLK1-213ENST00000492793 CENPJQ9HC77 1338 aaPredicted RBP2.52□□□□□ -2.01
CLK1-213ENST00000492793 IGKV2D-24A0A075B6R9 120 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 ZNF816-ZNF321PA0A0X1KG74 233 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 PLAC8L1A1L4L8 177 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 TRIM64CA6NLI5 447 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 CCDC169A6NNP5 214 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 RAB29O14966 203 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 SNAI2O43623 268 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 ANGPTL7O43827 346 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 GABARAPO95166 117 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 AIFM1O95831 613 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 IGLV2-23P01705 113 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 EIF2S2P20042 333 aaKnown RBP2.52□□□□□ -2.01
CLK1-213ENST00000492793 CCNHP51946 323 aaPredicted RBP2.52□□□□□ -2.01
CLK1-213ENST00000492793 EIF4EBP2Q13542 120 aaPredicted RBP2.52□□□□□ -2.01
CLK1-213ENST00000492793 GINS1Q14691 196 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 DEFB116Q30KQ4 102 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 PTPN20Q4JDL3 420 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 TFDP3Q5H9I0 405 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 SLC8B1Q6J4K2 584 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 ABHD13Q7L211 337 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 ZNF596Q8TC21 504 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 ZFP90Q8TF47 636 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 RNF139Q8WU17 664 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 PKNOX2Q96KN3 472 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 SERPINB12Q96P63 405 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 OR5B12Q96R08 314 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 SLC29A1Q99808 456 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 CCDC77Q9BR77 488 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 NMRK1Q9NWW6 199 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 ZNF629Q9UEG4 869 aaPredicted RBP2.52□□□□□ -2.01
CLK1-213ENST00000492793 TBX21Q9UL17 535 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 MYO10Q9HD67 2058 aa2.52□□□□□ -2.01
CLK1-213ENST00000492793 CTAGE15A4D2H0 777 aa2.51□□□□□ -2.01
CLK1-213ENST00000492793 ZNF716A6NP11 495 aa2.51□□□□□ -2.01
CLK1-213ENST00000492793 INS-IGF2F8WCM5 200 aa2.51□□□□□ -2.01
CLK1-213ENST00000492793 AP3B1O00203 1094 aa2.51□□□□□ -2.01
CLK1-213ENST00000492793 CLOCKO15516 846 aa2.51□□□□□ -2.01
CLK1-213ENST00000492793 ERLIN1O75477 346 aa2.51□□□□□ -2.01
CLK1-213ENST00000492793 UTS2O95399 124 aa2.51□□□□□ -2.01
CLK1-213ENST00000492793 ZNF735P0CB33 412 aa2.51□□□□□ -2.01
CLK1-213ENST00000492793 MAGP20916 626 aa2.51□□□□□ -2.01
CLK1-213ENST00000492793 HRH1P35367 487 aa2.51□□□□□ -2.01
CLK1-213ENST00000492793 NAA10P41227 235 aaPredicted RBP2.51□□□□□ -2.01
CLK1-213ENST00000492793 RFX3P48380 749 aa2.51□□□□□ -2.01
CLK1-213ENST00000492793 TMED10P49755 219 aaKnown RBP2.51□□□□□ -2.01
CLK1-213ENST00000492793 MNAT1P51948 309 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms