RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 MS4A3Q96HJ5 214 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 SNX18Q96RF0 628 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 SEPHS2Q99611 448 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 WFDC6Q9BQY6 131 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 WACQ9BTA9 647 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 NDEL1Q9GZM8 345 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 NANOGQ9H9S0 305 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 INIPQ9NRY2 104 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 NKIRAS2Q9NYR9 191 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 ZNF224Q9NZL3 707 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 CGGBP1Q9UFW8 167 aaPredicted RBP7.53□□□□□ -1.2
NUP50-217ENST00000491860 TMEFF2Q9UIK5 374 aaPredicted RBP7.53□□□□□ -1.2
NUP50-217ENST00000491860 MED31Q9Y3C7 131 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 A0A0A6YYJ9 748 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 H3BSA7 217 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 KPNA4O00629 521 aaPredicted RBP7.52□□□□□ -1.21
NUP50-217ENST00000491860 NDUFAB1O14561 156 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 MRASO14807 208 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 TCF21O43680 179 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 LYPD3O95274 346 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 SAGP10523 405 aaPredicted RBP7.52□□□□□ -1.21
NUP50-217ENST00000491860 ZNF250P15622 560 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 ACADSP16219 412 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 DRD4P21917 467 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 APLNRP35414 380 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 GZMMP51124 257 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 ARFIP2P53365 341 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 UGT2B15P54855 530 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 MRPS34P82930 218 aaKnown RBP7.52□□□□□ -1.21
NUP50-217ENST00000491860 HSF2Q03933 536 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 RPL18Q07020 188 aaKnown RBP7.52□□□□□ -1.21
NUP50-217ENST00000491860 ST3GAL3Q11203 375 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 SELPLGQ14242 412 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 C10orf128Q5T292 105 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 LRFN4Q6PJG9 635 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 WDR88Q6ZMY6 472 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 CALHM3Q86XJ0 350 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 OR4K5Q8NGD3 323 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 SYNPRQ8TBG9 265 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 MCHR2Q969V1 340 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 RBP7Q96R05 134 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 PRSS27Q9BQR3 290 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 ALG12Q9BV10 488 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 TMEM120AQ9BXJ8 343 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 MRPL13Q9BYD1 178 aaKnown RBP7.52□□□□□ -1.21
NUP50-217ENST00000491860 SIAEQ9HAT2 523 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 CCNB1IP1Q9NPC3 277 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 CYSLTR2Q9NS75 346 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 EIF3KQ9UBQ5 218 aaKnown RBP7.52□□□□□ -1.21
NUP50-217ENST00000491860 DUSP13Q9UII6 198 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 RIMS3Q9UJD0 308 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 SH3GLB1Q9Y371 365 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 GRIP1Q9Y3R0 1128 aa7.52□□□□□ -1.21
NUP50-217ENST00000491860 IGLV3-9A0A075B6K5 115 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 LRP5LA4QPB2 252 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 A6NIZ1 184 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 C17orf100A8MU93 164 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 FAM220BPB1ANY3 271 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 HAX1O00165 279 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 THY1P04216 161 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 LCKP06239 509 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 TSPAN19P0C672 248 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 TUBG1P23258 451 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 GCH1P30793 250 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 UCP2P55851 309 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 RAP1BP61224 184 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 PCBD1P61457 104 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 RAP1AP62834 184 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 SELENOWP63302 87 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 MELKQ14680 651 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 ZNF718Q3SXZ3 478 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 ZMAT1Q5H9K5 638 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 ELFN2Q5R3F8 820 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 THEM4Q5T1C6 240 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 ARL9Q6T311 187 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 DEF8Q6ZN54 512 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 RBM45Q8IUH3 476 aaKnown RBP7.51□□□□□ -1.21
NUP50-217ENST00000491860 ZNF584Q8IVC4 421 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 ALDH16A1Q8IZ83 802 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 RNF113BQ8IZP6 322 aaKnown RBP7.51□□□□□ -1.21
NUP50-217ENST00000491860 ZCCHC24Q8N2G6 241 aaKnown RBP7.51□□□□□ -1.21
NUP50-217ENST00000491860 LRRC17Q8N6Y2 441 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 OR2T12Q8NG77 320 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 OR4D11Q8NGI4 311 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 OR51F2Q8NH61 342 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 ASB10Q8WXI3 467 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 RAB39BQ96DA2 213 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 THOC1Q96FV9 657 aaKnown RBP7.51□□□□□ -1.21
NUP50-217ENST00000491860 PRRC1Q96M27 445 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 DIRC2Q96SL1 478 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 SH3GL3Q99963 347 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 SYT3Q9BQG1 590 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 TXNIPQ9H3M7 391 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 TPK1Q9H3S4 243 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 MEPEQ9NQ76 525 aaPredicted RBP7.51□□□□□ -1.21
NUP50-217ENST00000491860 HINT3Q9NQE9 182 aaKnown RBP7.51□□□□□ -1.21
NUP50-217ENST00000491860 TUBG2Q9NRH3 451 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 DECR2Q9NUI1 292 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 TAAR3PQ9P1P4 343 aa7.51□□□□□ -1.21
NUP50-217ENST00000491860 HIF3AQ9Y2N7 669 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms