RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 NPIPB9F8W1W9 429 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 OIP5O43482 229 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 NGFRP08138 427 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 SLC6A1P30531 599 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 ATP6V1E1P36543 226 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 B3GALT5-AS1P59052 145 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 TAS2R41P59536 307 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 LSM11P83369 360 aaKnown RBP eCLIP8.43□□□□□ -1.06
BRCA1-219ENST00000491747 ARHGAP11BQ3KRB8 267 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 VASNQ6EMK4 673 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 LAMTOR1Q6IAA8 161 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 HEPHL1Q6MZM0 1159 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 RASSF6Q6ZTQ3 369 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 COMTD1Q86VU5 262 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 SARAFQ96BY9 339 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 NPAS1Q99742 590 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 DHRS9Q9BPW9 319 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 G6PC3Q9BUM1 346 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 TBL1XR1Q9BZK7 514 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 UBQLN4Q9NRR5 601 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 EXTL2Q9UBQ6 330 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 SLC13A4Q9UKG4 626 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 ING4Q9UNL4 249 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 ASH1LQ9NR48 2969 aaKnown RBP8.43□□□□□ -1.06
BRCA1-219ENST00000491747 A0A087WUU8 490 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 IGLV3-32A0A0A0MS00 114 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 E9PLN8 166 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 NCR1O76036 304 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 DHFRP00374 187 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 LALBAP00709 142 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 DPP4P27487 766 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 SRD5A2P31213 254 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 STARP49675 285 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 GFRA1P56159 465 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 CTBP2P56545 445 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 KLHL26Q53HC5 615 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 LRRC28Q86X40 367 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-219ENST00000491747 LRRC17Q8N6Y2 441 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 OR4K17Q8NGC6 315 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 OR4M1Q8NGD0 313 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 OR5M1Q8NGP8 315 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 OR14L1PQ8NHC6 308 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 OSTF1Q92882 214 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 PHF21AQ96BD5 680 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 DCLRE1CQ96SD1 692 aaKnown RBP8.43□□□□□ -1.06
BRCA1-219ENST00000491747 VKORC1Q9BQB6 163 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 PINK1Q9BXM7 581 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 CTPS2Q9NRF8 586 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 SDHAF3Q9NRP4 125 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 MED17Q9NVC6 651 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 TAS2R10Q9NYW0 307 aa8.43□□□□□ -1.06
BRCA1-219ENST00000491747 RPH3AQ9Y2J0 694 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-219ENST00000491747 ICE1Q9Y2F5 2266 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 USP9YO00507 2555 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-219ENST00000491747 HEATR5AQ86XA9 2040 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 A0A0G2JPF8 293 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 DUXAA6NLW8 204 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 HNRNPCL2B2RXH8 293 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 HNRNPCL3B7ZW38 293 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 SHISA8B8ZZ34 492 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 SMLR1H3BR10 107 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 IGHA1P01876 353 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 HNRNPCL4P0DMR1 293 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 HK1P19367 917 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 LCN1P31025 176 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 CD79BP40259 229 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 MTNR1BP49286 362 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 AP2S1P53680 142 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-219ENST00000491747 DSCR4P56555 118 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-219ENST00000491747 PER3P56645 1201 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 C17orf67Q0P5P2 114 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 ST3GAL3Q11203 375 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 TRAM2Q15035 370 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 NDUFAF6Q330K2 333 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 SMUG1Q53HV7 270 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 CLEC12AQ5QGZ9 265 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 ZBTB37Q5TC79 503 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 ARSKQ6UWY0 536 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 MRGPRGQ86SM5 289 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 C9orf62Q8N4C0 152 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 OR4F15Q8NGB8 312 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 OR8D4Q8NGM9 314 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 MARVELD3Q96A59 401 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 RFT1Q96AA3 541 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 ZNF524Q96C55 264 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 ZG16BQ96DA0 208 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 WDYHV1Q96HA8 205 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 MED28Q9H204 178 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 ANKRD19PQ9H560 264 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 RANBP3Q9H6Z4 567 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-219ENST00000491747 ALKBH4Q9NXW9 302 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 H2AFY2Q9P0M6 372 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-219ENST00000491747 SLC23A1Q9UHI7 598 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 DKKL1Q9UK85 242 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 LIPT1Q9Y234 373 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 MRPS18CQ9Y3D5 142 aaKnown RBP8.42□□□□□ -1.06
BRCA1-219ENST00000491747 PCNX1Q96RV3 2341 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 A0A1W2PQD3 144 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 SHISA3A0PJX4 238 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 CD8B2A6NJW9 211 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms