RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 OR4K5Q8NGD3 323 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 UBASH3BQ8TF42 649 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 SNX33Q8WV41 574 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 C11orf40Q8WZ69 217 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 POP5Q969H6 163 aaKnown RBP14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 FOXN4Q96NZ1 517 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 PRSS27Q9BQR3 290 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 ANKRD19PQ9H560 264 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 SMURF2Q9HAU4 748 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 KRCC1Q9NPI7 259 aaPredicted RBP14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 MEPEQ9NQ76 525 aaPredicted RBP14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 DUSP13Q9UII6 198 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 NIPBLQ6KC79 2804 aaeCLIP14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 LOC100289279A0A1B0GTE1 492 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 A6NIZ1 184 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 NPIPB13A6NJU9 1138 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 NPIPB4C9JG80 1138 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 LMX1BO60663 402 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 THY1P04216 161 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 PGA4P0DJD7 388 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 PGA3P0DJD8 388 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 IFI30P13284 250 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 AQP2P41181 271 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 GSK3BP49841 420 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 RAP1BP61224 184 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 PCBD1P61457 104 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 RAP1AP62834 184 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 CD47Q08722 323 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 NKPD1Q17RQ9 610 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 IFI44LQ53G44 452 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 ARL9Q6T311 187 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 LSRQ86X29 649 aaPredicted RBP14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 SKA3Q8IX90 412 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 C1orf174Q8IYL3 243 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 OFCC1Q8IZS5 231 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 PGAM4Q8N0Y7 254 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 RBM15BQ8NDT2 890 aaKnown RBP14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 NOXO1Q8NFA2 376 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 MCHR2Q969V1 340 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 BPIFA2Q96DR5 249 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 MS4A3Q96HJ5 214 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 BCL2L14Q9BZR8 327 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 SEC61A2Q9H9S3 476 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 SIAEQ9HAT2 523 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 SLCO1C1Q9NYB5 712 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 TAGLN3Q9UI15 199 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 SAMD4AQ9UPU9 718 aaKnown RBP14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 ALPK2Q86TB3 2170 aa14.31□□□□□ -0.12
PDLIM2-217ENST00000491330 SHOX2O60902 331 aaPredicted RBP14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 LY6HO94772 140 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 STAMBPO95630 424 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 FAM107AO95990 144 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 LCKP06239 509 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 FAM157CP0CG43 387 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 ZNF35P13682 527 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 HSD17B1P14061 328 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 TNFRSF1BP20333 461 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 UGT2B15P54855 530 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 KRTAP1-1Q07627 177 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 KRT72Q14CN4 511 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 FXNQ16595 210 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 SAMD4BQ5PRF9 694 aaKnown RBP14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 THEM4Q5T1C6 240 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 TMEM154Q6P9G4 183 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 LRFN4Q6PJG9 635 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 C16orf89Q6UX73 402 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 NHLRC1Q6VVB1 395 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 ZNF730Q6ZMV8 503 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 OAFQ86UD1 273 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 ARHGAP24Q8N264 748 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 ZNF786Q8N393 782 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 SYT14Q8NB59 555 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 PFN4Q8NHR9 129 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 FAM162AQ96A26 154 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 SH3GL3Q99963 347 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 TXNIPQ9H3M7 391 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 GORASP2Q9H8Y8 452 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 CSPG4Q6UVK1 2322 aa14.3□□□□□ -0.12
PDLIM2-217ENST00000491330 XKRYO14609 159 aa14.29□□□□□ -0.12
PDLIM2-217ENST00000491330 TRMUO75648 421 aaKnown RBP14.29□□□□□ -0.12
PDLIM2-217ENST00000491330 TGFAP01135 160 aa14.29□□□□□ -0.12
PDLIM2-217ENST00000491330 ZNF23P17027 643 aa14.29□□□□□ -0.12
PDLIM2-217ENST00000491330 SLC9A3P48764 834 aa14.29□□□□□ -0.12
PDLIM2-217ENST00000491330 MRPS34P82930 218 aaKnown RBP14.29□□□□□ -0.12
PDLIM2-217ENST00000491330 TEKQ02763 1124 aa14.29□□□□□ -0.12
PDLIM2-217ENST00000491330 SGCAQ16586 387 aa14.29□□□□□ -0.12
PDLIM2-217ENST00000491330 PRIMA1Q86XR5 153 aa14.29□□□□□ -0.12
PDLIM2-217ENST00000491330 ASB10Q8WXI3 467 aa14.29□□□□□ -0.12
PDLIM2-217ENST00000491330 HPS1Q92902 700 aa14.29□□□□□ -0.12
PDLIM2-217ENST00000491330 ZNF347Q96SE7 839 aa14.29□□□□□ -0.12
PDLIM2-217ENST00000491330 ALG12Q9BV10 488 aa14.29□□□□□ -0.12
PDLIM2-217ENST00000491330 MAGEL2Q9UJ55 1249 aa14.29□□□□□ -0.12
PDLIM2-217ENST00000491330 TMEM5Q9Y2B1 443 aa14.29□□□□□ -0.12
PDLIM2-217ENST00000491330 HIF3AQ9Y2N7 669 aa14.29□□□□□ -0.12
PDLIM2-217ENST00000491330 ZFHX3Q15911 3703 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 ZNF503-AS2A6NEH8 195 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 EFCAB9A8MZ26 197 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 VWC2LB2RUY7 222 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 TSPAN19P0C672 248 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 IGHV4-31P0DP07 118 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms