RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 RAP1BP61224 184 aa16.44■□□□□ 0.22
MRPL55-230ENST00000489430 RPS23P62266 143 aaKnown RBP16.44■□□□□ 0.22
MRPL55-230ENST00000489430 RAP1AP62834 184 aa16.44■□□□□ 0.22
MRPL55-230ENST00000489430 LSM11P83369 360 aaKnown RBP eCLIP16.44■□□□□ 0.22
MRPL55-230ENST00000489430 KRT72Q14CN4 511 aa16.44■□□□□ 0.22
MRPL55-230ENST00000489430 THEM4Q5T1C6 240 aa16.44■□□□□ 0.22
MRPL55-230ENST00000489430 LRRC75AQ8NAA5 344 aa16.44■□□□□ 0.22
MRPL55-230ENST00000489430 SYT14Q8NB59 555 aa16.44■□□□□ 0.22
MRPL55-230ENST00000489430 OR4K5Q8NGD3 323 aa16.44■□□□□ 0.22
MRPL55-230ENST00000489430 SLC7A13Q8TCU3 470 aa16.44■□□□□ 0.22
MRPL55-230ENST00000489430 SIAEQ9HAT2 523 aa16.44■□□□□ 0.22
MRPL55-230ENST00000489430 KRCC1Q9NPI7 259 aaPredicted RBP16.44■□□□□ 0.22
MRPL55-230ENST00000489430 SLC22A23A1A5C7 686 aa16.43■□□□□ 0.22
MRPL55-230ENST00000489430 AHCYL1O43865 530 aa16.43■□□□□ 0.22
MRPL55-230ENST00000489430 SLC25A16P16260 332 aa16.43■□□□□ 0.22
MRPL55-230ENST00000489430 HOXB4P17483 251 aaPredicted RBP16.43■□□□□ 0.22
MRPL55-230ENST00000489430 THBS4P35443 961 aa16.43■□□□□ 0.22
MRPL55-230ENST00000489430 GLRXP35754 106 aa16.43■□□□□ 0.22
MRPL55-230ENST00000489430 SMIM11AP58511 58 aa16.43■□□□□ 0.22
MRPL55-230ENST00000489430 SNTB2Q13425 540 aaKnown RBP16.43■□□□□ 0.22
MRPL55-230ENST00000489430 FHL1Q13642 323 aa16.43■□□□□ 0.22
MRPL55-230ENST00000489430 GKAP1Q5VSY0 366 aaPredicted RBP16.43■□□□□ 0.22
MRPL55-230ENST00000489430 TMEM53Q6P2H8 277 aa16.43■□□□□ 0.22
MRPL55-230ENST00000489430 SLC16A14Q7RTX9 510 aa16.43■□□□□ 0.22
MRPL55-230ENST00000489430 HDAC2Q92769 488 aaKnown RBP16.43■□□□□ 0.22
MRPL55-230ENST00000489430 PYURFQ96I23 114 aa16.43■□□□□ 0.22
MRPL55-230ENST00000489430 DHRS1Q96LJ7 313 aa16.43■□□□□ 0.22
MRPL55-230ENST00000489430 RBP7Q96R05 134 aa16.43■□□□□ 0.22
MRPL55-230ENST00000489430 CCT8L2Q96SF2 557 aa16.43■□□□□ 0.22
MRPL55-230ENST00000489430 CDRT15Q96T59 188 aa16.43■□□□□ 0.22
MRPL55-230ENST00000489430 ARL8BQ9NVJ2 186 aa16.43■□□□□ 0.22
MRPL55-230ENST00000489430 CMAHPQ9Y471 501 aa16.43■□□□□ 0.22
MRPL55-230ENST00000489430 NSD1Q96L73 2696 aaPredicted RBP16.43■□□□□ 0.22
MRPL55-230ENST00000489430 HEATR1Q9H583 2144 aaKnown RBP16.43■□□□□ 0.22
MRPL55-230ENST00000489430 NDUFS8O00217 210 aa16.42■□□□□ 0.22
MRPL55-230ENST00000489430 FAM107AO95990 144 aa16.42■□□□□ 0.22
MRPL55-230ENST00000489430 ERCC1P07992 297 aaPredicted RBP16.42■□□□□ 0.22
MRPL55-230ENST00000489430 FUT4P22083 530 aa16.42■□□□□ 0.22
MRPL55-230ENST00000489430 CTXN1P60606 82 aa16.42■□□□□ 0.22
MRPL55-230ENST00000489430 GALK2Q01415 458 aa16.42■□□□□ 0.22
MRPL55-230ENST00000489430 ZBED5Q49AG3 693 aa16.42■□□□□ 0.22
MRPL55-230ENST00000489430 VHLLQ6RSH7 139 aa16.42■□□□□ 0.22
MRPL55-230ENST00000489430 ARHGAP24Q8N264 748 aa16.42■□□□□ 0.22
MRPL55-230ENST00000489430 RNF148Q8N7C7 305 aa16.42■□□□□ 0.22
MRPL55-230ENST00000489430 OR51A7Q8NH64 312 aa16.42■□□□□ 0.22
MRPL55-230ENST00000489430 FAM168AQ92567 244 aa16.42■□□□□ 0.22
MRPL55-230ENST00000489430 MS4A3Q96HJ5 214 aa16.42■□□□□ 0.22
MRPL55-230ENST00000489430 TNFRSF13CQ96RJ3 184 aa16.42■□□□□ 0.22
MRPL55-230ENST00000489430 DOK1Q99704 481 aa16.42■□□□□ 0.22
MRPL55-230ENST00000489430 SH3GL3Q99963 347 aa16.42■□□□□ 0.22
MRPL55-230ENST00000489430 RAB1BQ9H0U4 201 aa16.42■□□□□ 0.22
MRPL55-230ENST00000489430 KCNN2Q9H2S1 579 aa16.42■□□□□ 0.22
MRPL55-230ENST00000489430 SLC7A8Q9UHI5 535 aa16.42■□□□□ 0.22
MRPL55-230ENST00000489430 ZNF346Q9UL40 294 aaKnown RBP16.42■□□□□ 0.22
MRPL55-230ENST00000489430 TRAV27A0A087WT01 109 aa16.41■□□□□ 0.22
MRPL55-230ENST00000489430 hCG_2039718K7EN88 272 aa16.41■□□□□ 0.22
MRPL55-230ENST00000489430 CDC42EP2O14613 210 aa16.41■□□□□ 0.22
MRPL55-230ENST00000489430 SNAP29O95721 258 aa16.41■□□□□ 0.22
MRPL55-230ENST00000489430 CD14P08571 375 aa16.41■□□□□ 0.22
MRPL55-230ENST00000489430 PLP2Q04941 152 aa16.41■□□□□ 0.22
MRPL55-230ENST00000489430 CD47Q08722 323 aa16.41■□□□□ 0.22
MRPL55-230ENST00000489430 RAB39AQ14964 217 aa16.41■□□□□ 0.22
MRPL55-230ENST00000489430 KRT80Q6KB66 452 aa16.41■□□□□ 0.22
MRPL55-230ENST00000489430 PODNL1Q6PEZ8 512 aa16.41■□□□□ 0.22
MRPL55-230ENST00000489430 TBPL2Q6SJ96 375 aa16.41■□□□□ 0.22
MRPL55-230ENST00000489430 ZNF584Q8IVC4 421 aa16.41■□□□□ 0.22
MRPL55-230ENST00000489430 ARIH2OSQ8N7S6 290 aa16.41■□□□□ 0.22
MRPL55-230ENST00000489430 RBM15BQ8NDT2 890 aaKnown RBP16.41■□□□□ 0.22
MRPL55-230ENST00000489430 OR1J2Q8NGS2 313 aa16.41■□□□□ 0.22
MRPL55-230ENST00000489430 ZNF519Q8TB69 540 aa16.41■□□□□ 0.22
MRPL55-230ENST00000489430 MRPL24Q96A35 216 aaKnown RBP16.41■□□□□ 0.22
MRPL55-230ENST00000489430 NSMCE2Q96MF7 247 aa16.41■□□□□ 0.22
MRPL55-230ENST00000489430 WACQ9BTA9 647 aa16.41■□□□□ 0.22
MRPL55-230ENST00000489430 LRMDAQ9H2I8 198 aa16.41■□□□□ 0.22
MRPL55-230ENST00000489430 ZANQ9Y493 2812 aa16.41■□□□□ 0.22
MRPL55-230ENST00000489430 IGHV4-30-2A0A087WSY4 118 aa16.4■□□□□ 0.22
MRPL55-230ENST00000489430 SEMG1P04279 462 aa16.4■□□□□ 0.22
MRPL55-230ENST00000489430 MMP7P09237 267 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-230ENST00000489430 TCN1P20061 433 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-230ENST00000489430 GUCA1AP43080 201 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-230ENST00000489430 LIMS1P48059 325 aa16.4■□□□□ 0.22
MRPL55-230ENST00000489430 VLDLRP98155 873 aa16.4■□□□□ 0.22
MRPL55-230ENST00000489430 MYBPC1Q00872 1141 aa16.4■□□□□ 0.22
MRPL55-230ENST00000489430 LOXL1Q08397 574 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-230ENST00000489430 TOP3AQ13472 1001 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-230ENST00000489430 IQCCQ4KMZ1 466 aa16.4■□□□□ 0.22
MRPL55-230ENST00000489430 FAM27BQ5VT28 67 aa16.4■□□□□ 0.22
MRPL55-230ENST00000489430 SLC25A47Q6Q0C1 308 aa16.4■□□□□ 0.22
MRPL55-230ENST00000489430 DEFB107AQ8IZN7 70 aa16.4■□□□□ 0.22
MRPL55-230ENST00000489430 FITM2Q8N6M3 262 aa16.4■□□□□ 0.22
MRPL55-230ENST00000489430 ZNF525Q8N782 197 aa16.4■□□□□ 0.22
MRPL55-230ENST00000489430 SLC30A7Q8NEW0 376 aa16.4■□□□□ 0.22
MRPL55-230ENST00000489430 OR13C2Q8NGS9 318 aa16.4■□□□□ 0.22
MRPL55-230ENST00000489430 FGFBP3Q8TAT2 258 aa16.4■□□□□ 0.22
MRPL55-230ENST00000489430 C10orf105Q8TEF2 133 aa16.4■□□□□ 0.22
MRPL55-230ENST00000489430 NEU4Q8WWR8 484 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-230ENST00000489430 MCUR1Q96AQ8 359 aa16.4■□□□□ 0.22
MRPL55-230ENST00000489430 SORCS2Q96PQ0 1159 aa16.4■□□□□ 0.22
MRPL55-230ENST00000489430 GPX7Q96SL4 187 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-230ENST00000489430 RNF121Q9H920 327 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms