RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 F6UB75 175 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 AIREO43918 545 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 TNFSF13O75888 250 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 CCNB2O95067 398 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 SERPINE2P07093 398 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 ACSM4P0C7M7 580 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 GABRR1P24046 479 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 ZBTB25P24278 435 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 CD1BP29016 333 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 STX17P56962 302 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 DAOAP59103 153 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 SLC25A11Q02978 314 aaKnown RBP3.03□□□□□ -1.92
XRN1-213ENST00000489241 DNAJC3Q13217 504 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 AQP6Q13520 282 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 PAGE3Q5JUK9 113 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 TTC29Q8NA56 475 aaPredicted RBP3.03□□□□□ -1.92
XRN1-213ENST00000489241 OR1N2Q8NGR9 330 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 OR10R2Q8NGX6 335 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 SDR42E1Q8WUS8 393 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 NDRG1Q92597 394 aaKnown RBP3.03□□□□□ -1.92
XRN1-213ENST00000489241 TMEM101Q96IK0 257 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 B3GALT6Q96L58 329 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 MAGEB18Q96M61 343 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 OR5B12Q96R08 314 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 UCK2Q9BZX2 261 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 ACTR3CQ9C0K3 210 aaPredicted RBP3.03□□□□□ -1.92
XRN1-213ENST00000489241 OR11A1Q9GZK7 315 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 RGCCQ9H4X1 137 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 PXMP2Q9NR77 195 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 PLSCR3Q9NRY6 295 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 HRASLS2Q9NWW9 162 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 LGALS13Q9UHV8 139 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 GNPTGQ9UJJ9 305 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 GOLT1BQ9Y3E0 138 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 TNIKQ9UKE5 1360 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 PLEKHG1Q9ULL1 1385 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 RLFQ13129 1914 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 A0A0G2JN53 185 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 GABRR3A8MPY1 467 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 KLLNB2CW77 178 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 M0R3G1 203 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 TRDMT1O14717 391 aaKnown RBP3.02□□□□□ -1.93
XRN1-213ENST00000489241 FAM189A1O60320 539 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 CLDN11O75508 207 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 CD160O95971 181 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 OTCP00480 354 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 GKN3PP0CG01 181 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 UBCP0CG48 685 aaKnown RBP3.02□□□□□ -1.93
XRN1-213ENST00000489241 MGMTP16455 207 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 CPN2P22792 545 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 SERPINB5P36952 375 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 CCR8P51685 355 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 FGF8P55075 233 aaPredicted RBP3.02□□□□□ -1.93
XRN1-213ENST00000489241 RAD51Q06609 339 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 HERPUD1Q15011 391 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 WDR43Q15061 677 aaKnown RBP eCLIP3.02□□□□□ -1.93
XRN1-213ENST00000489241 SF3A2Q15428 464 aaKnown RBP3.02□□□□□ -1.93
XRN1-213ENST00000489241 CCDC14Q49A88 953 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 BEX5Q5H9J7 111 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 STUMQ69YW2 141 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 TTC23LQ6PF05 361 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 RNF165Q6ZSG1 346 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 C20orf203Q8NBC4 194 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 OR4F15Q8NGB8 312 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 OR56A4Q8NGH8 313 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 MYDGFQ969H8 173 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 LRRC58Q96CX6 371 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 PIK3IP1Q96FE7 263 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 SH3GL3Q99963 347 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 NRIP2Q9BQI9 281 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 NXF3Q9H4D5 531 aaKnown RBP3.02□□□□□ -1.93
XRN1-213ENST00000489241 TDRD3Q9H7E2 651 aaKnown RBP3.02□□□□□ -1.93
XRN1-213ENST00000489241 NTN4Q9HB63 628 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 BEX1Q9HBH7 125 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 CHRAC1Q9NRG0 131 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 CCDC59Q9P031 241 aaKnown RBP3.02□□□□□ -1.93
XRN1-213ENST00000489241 MYEF2Q9P2K5 600 aaKnown RBP3.02□□□□□ -1.93
XRN1-213ENST00000489241 KIF27Q86VH2 1401 aa3.02□□□□□ -1.93
XRN1-213ENST00000489241 MROH7-TTC4A0A0A0MT08 1334 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 SCAMP2O15127 329 aaKnown RBP3.01□□□□□ -1.93
XRN1-213ENST00000489241 HDAC3O15379 428 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 SLC31A2O15432 143 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 NPIPB7O75200 414 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 FCN3O75636 299 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 CRYGCP07315 174 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 PLEKP08567 350 aaPredicted RBP3.01□□□□□ -1.93
XRN1-213ENST00000489241 CSF3P09919 207 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 TDGF1P13385 188 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 CTRB1P17538 263 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 PRKACAP17612 351 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 MSR1P21757 451 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 CAV2P51636 162 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 TDGF1P3P51864 188 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 CLDN18P56856 261 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 CARD18P57730 90 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 TIMM10P62072 90 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 RPS21P63220 83 aaKnown RBP3.01□□□□□ -1.93
XRN1-213ENST00000489241 TRAM2Q15035 370 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 KCTD19Q17RG1 926 aaPredicted RBP3.01□□□□□ -1.93
XRN1-213ENST00000489241 ZNF630Q2M218 657 aaPredicted RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms