RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 SLC6A19Q695T7 634 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 OR51A2Q8NGJ7 313 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 OR1L3Q8NH93 324 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 ZNF721Q8TF20 911 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 DUSP19Q8WTR2 217 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 NKD1Q969G9 470 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 CMTM3Q96MX0 182 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 C7orf50Q9BRJ6 194 aaKnown RBP11.44□□□□□ -0.58
CLIC4-202ENST00000488683 PLEKHA1Q9HB21 404 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 TRAV18A0A075B6X5 111 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 IGHV1OR15-9A0A0B4J2B8 117 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 TRBV5-5A0A0J9YX44 114 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 H3BMH7 237 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 HIST1H2ABP04908 130 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 NME1P15531 152 aaKnown RBP11.44□□□□□ -0.58
CLIC4-202ENST00000488683 ALOX5APP20292 161 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 IL12BP29460 328 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 ART1P52961 327 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 GRK1Q15835 563 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 ACKR1Q16570 336 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 HIST3H2AQ7L7L0 130 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 FAM109AQ8N4B1 249 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 HIST1H2ACQ93077 130 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 MRPL48Q96GC5 212 aaKnown RBP11.44□□□□□ -0.58
CLIC4-202ENST00000488683 LCORQ96JN0 433 aaPredicted RBP11.44□□□□□ -0.58
CLIC4-202ENST00000488683 ADAM19Q9H013 955 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 NARFLQ9H6Q4 476 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 RANBP3Q9H6Z4 567 aaPredicted RBP11.44□□□□□ -0.58
CLIC4-202ENST00000488683 EXOSC3Q9NQT5 275 aaKnown RBP11.44□□□□□ -0.58
CLIC4-202ENST00000488683 MOKQ9UQ07 419 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 VDAC3Q9Y277 283 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 RNF215Q9Y6U7 377 aa11.44□□□□□ -0.58
CLIC4-202ENST00000488683 TRIOBPQ9H2D6 2365 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 DCDC2BA2VCK2 349 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 FITM1A5D6W6 292 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 RAG2P55895 527 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 FOXK1P85037 733 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 C19orf57Q0VDD7 668 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 ELOCQ15369 112 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 TCTE1Q5JU00 501 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 SEZ6L2Q6UXD5 910 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 NDUFAF7Q7L592 441 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 SIX5Q8N196 739 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 STK35Q8TDR2 534 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 HGDQ93099 445 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 HAVCR1Q96D42 359 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 RBP7Q96R05 134 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 INTS14Q96SY0 518 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 NUDT22Q9BRQ3 303 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 FOXQ1Q9C009 403 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 MRPL22Q9NWU5 206 aaKnown RBP11.43□□□□□ -0.58
CLIC4-202ENST00000488683 CPAMD8Q8IZJ3 1885 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 IGKV3D-11A0A0A0MRZ8 115 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 IGKV1D-43A0A0B4J1Z2 117 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 TLCD2A6NGC4 264 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 LILRA5A6NI73 299 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 I3L521 148 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 IGF2P01344 180 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 TACSTD2P09758 323 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 CXCL2P19875 107 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 RORAP35398 523 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 AP2S1P53680 142 aaPredicted RBP11.43□□□□□ -0.58
CLIC4-202ENST00000488683 INSM1Q01101 510 aaPredicted RBP11.43□□□□□ -0.58
CLIC4-202ENST00000488683 INPP5JQ15735 1006 aaPredicted RBP11.43□□□□□ -0.58
CLIC4-202ENST00000488683 CLPPQ16740 277 aaPredicted RBP11.43□□□□□ -0.58
CLIC4-202ENST00000488683 EEF1A1P5Q5VTE0 462 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 ZNF782Q6ZMW2 699 aaPredicted RBP11.43□□□□□ -0.58
CLIC4-202ENST00000488683 C17orf107Q6ZR85 190 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 TSTD1Q8NFU3 115 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 METTL21AQ8WXB1 218 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 ARL5BQ96KC2 179 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 SLC46A1Q96NT5 459 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 GINS4Q9BRT9 223 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 LMAN1LQ9HAT1 526 aa11.43□□□□□ -0.58
CLIC4-202ENST00000488683 A0A1B0GVI7 797 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 A0A1W2PR77 199 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 FRG2CA6NGY1 282 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 M0QYG6 137 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 SIGLEC5O15389 551 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 BGLAPP02818 100 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 CSRP1P21291 193 aaKnown RBP11.42□□□□□ -0.58
CLIC4-202ENST00000488683 GALNSP34059 522 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 POU3F4P49335 361 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 ARRB1P49407 418 aaPredicted RBP11.42□□□□□ -0.58
CLIC4-202ENST00000488683 ADAM8P78325 824 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 SIGLEC14Q08ET2 396 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 PLCXD2Q0VAA5 305 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 BIKQ13323 160 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 ANGPT1Q15389 498 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 DCAF12L2Q5VW00 463 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 RNF144BQ7Z419 303 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 FGD2Q7Z6J4 655 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 SLC38A6Q8IZM9 456 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 OR4C16Q8NGL9 310 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 MIB2Q96AX9 1013 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 NXPE2Q96DL1 559 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 CCNL2Q96S94 520 aaPredicted RBP11.42□□□□□ -0.58
CLIC4-202ENST00000488683 EMC6Q9BV81 110 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 TBL1XR1Q9BZK7 514 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms