RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 LEG1Q6P5S2 330 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 ANKRD16Q6P6B7 361 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 CD300LDQ6UXZ3 194 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 ADCK1Q86TW2 530 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 JAZF1Q86VZ6 243 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 HIPK1Q86Z02 1210 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 ZDHHC13Q8IUH4 622 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 PQLC1Q8N2U9 271 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 SVOPLQ8N434 492 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 C17orf78Q8N4C9 275 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 OR4K13Q8NH42 304 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 NRBF2Q96F24 287 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 MUS81Q96NY9 551 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 FOXN4Q96NZ1 517 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 HS3ST6Q96QI5 342 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 FOXB1Q99853 325 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 RERGLQ9H628 205 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 ZNF556Q9HAH1 456 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 NOX3Q9HBY0 568 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 PAPOLBQ9NRJ5 636 aaKnown RBP9.67□□□□□ -0.86
UBE4B-210ENST00000488228 TMEM38BQ9NVV0 291 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 ZNF226Q9NYT6 803 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 SLC25A15Q9Y619 301 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 SPG11Q96JI7 2443 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.66□□□□□ -0.86
UBE4B-210ENST00000488228 A0A1W2PPL8 197 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 ARPC3O15145 178 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 HLA-HP01893 362 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 NR2C1P13056 603 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 APEHP13798 732 aaKnown RBP9.66□□□□□ -0.86
UBE4B-210ENST00000488228 IGFBP5P24593 272 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 CDAP32320 146 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 CDKN2AP42771 156 aaKnown RBP9.66□□□□□ -0.86
UBE4B-210ENST00000488228 CAPZA2P47755 286 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 ZNF83P51522 516 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 ZNF84P51523 738 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 ZNF133P52736 654 aaPredicted RBP9.66□□□□□ -0.86
UBE4B-210ENST00000488228 UBE2NP61088 152 aaKnown RBP9.66□□□□□ -0.86
UBE4B-210ENST00000488228 TLE4Q04727 773 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.66□□□□□ -0.86
UBE4B-210ENST00000488228 SPOCK1Q08629 439 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 RCN1Q15293 331 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 OTPQ5XKR4 325 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 SLC25A47Q6Q0C1 308 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 TMEM200AQ86VY9 491 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 LNX2Q8N448 690 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 CYB561A3Q8NBI2 242 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 OR2T33Q8NG76 320 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 HSD17B8Q92506 261 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 MUCL1Q96DR8 90 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 PIK3IP1Q96FE7 263 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 TSSK2Q96PF2 358 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 NMNAT3Q96T66 252 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 CIB1Q99828 191 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 C1QTNF6Q9BXI9 259 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 SLC24A3Q9HC58 644 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 KRT84Q9NSB2 600 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 ZNF224Q9NZL3 707 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 VSX1Q9NZR4 365 aaPredicted RBP9.66□□□□□ -0.86
UBE4B-210ENST00000488228 TMEFF2Q9UIK5 374 aaPredicted RBP9.66□□□□□ -0.86
UBE4B-210ENST00000488228 AMDHD2Q9Y303 409 aa9.66□□□□□ -0.86
UBE4B-210ENST00000488228 ARPC4-TTLL3A0A0A6YYG9 625 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 A0A1W2PPR1 153 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 M0R1B8 84 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 DCTN6O00399 190 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 EI24O14681 340 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 CASKO14936 926 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 BAG2O95816 211 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 GPANK1O95872 356 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 HRGP04196 525 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 PATE4P0C8F1 98 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 OSMP13725 252 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 LOXP28300 417 aaPredicted RBP9.65□□□□□ -0.86
UBE4B-210ENST00000488228 PPP2R2BQ00005 443 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 BSPH1Q075Z2 132 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 COX10Q12887 443 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 ETFDHQ16134 617 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 THEM4Q5T1C6 240 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 FBXW10Q5XX13 1052 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 KDM4DQ6B0I6 523 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 ZNF627Q7L945 461 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 MYPOPQ86VE0 399 aaPredicted RBP9.65□□□□□ -0.86
UBE4B-210ENST00000488228 P2RY8Q86VZ1 359 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 SKA3Q8IX90 412 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 C10orf67Q8IYJ2 551 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 PARP8Q8N3A8 854 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 OR52E2Q8NGJ4 325 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 DNAJC9Q8WXX5 260 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 NABP1Q96AH0 204 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 PLPPR2Q96GM1 343 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 RBP7Q96R05 134 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 SH3GL3Q99963 347 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 NUAK2Q9H093 628 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 SEC61A2Q9H9S3 476 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 RPRD1BQ9NQG5 326 aaKnown RBP9.65□□□□□ -0.86
UBE4B-210ENST00000488228 NOTCH2Q04721 2471 aa9.65□□□□□ -0.86
UBE4B-210ENST00000488228 IGLV1-36A0A0B4J1U3 117 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 OR6C68A6NDL8 312 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 M0R129 80 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 IDH3BO43837 385 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms