RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 LEG1Q6P5S2 330 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 CCDC36Q8IYA8 594 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 C17orf78Q8N4C9 275 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 PACRGLQ8N7B6 248 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 NPEPL1Q8NDH3 523 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 OR52E2Q8NGJ4 325 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 OR1K1Q8NGR3 316 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 OR4K13Q8NH42 304 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 NMNAT3Q96T66 252 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 DDOQ99489 341 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 ACTR6Q9GZN1 396 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 CMC2Q9NRP2 79 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 NKX1-2Q9UD57 310 aaPredicted RBP11.69□□□□□ -0.54
COL4A6-207ENST00000487645 RRP15Q9Y3B9 282 aaKnown RBP11.69□□□□□ -0.54
COL4A6-207ENST00000487645 A1L4Q6 167 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 OR6C68A6NDL8 312 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 TUBAL3A6NHL2 446 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 OR5H1A6NKK0 313 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 RIIAD1A6NNX1 92 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 KHDRBS3O75525 346 aaKnown RBP11.68□□□□□ -0.54
COL4A6-207ENST00000487645 NPR2P20594 1047 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 CCKARP32238 428 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 GUCA1AP43080 201 aaPredicted RBP11.68□□□□□ -0.54
COL4A6-207ENST00000487645 KIR2DL3P43628 341 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 TSC22D1Q15714 1073 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 OGFRL1Q5TC84 451 aaPredicted RBP11.68□□□□□ -0.54
COL4A6-207ENST00000487645 C9orf135Q5VTT2 229 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 SLX4IPQ5VYV7 408 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 TMEM236Q5W0B7 351 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 LPCAT4Q643R3 524 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 DNM1P34Q6PK57 102 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 SLC37A3Q8NCC5 494 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 S100PBPQ96BU1 408 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 MUCL1Q96DR8 90 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 RDH12Q96NR8 316 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 DACH2Q96NX9 599 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 WFIKKN1Q96NZ8 548 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 FOXB1Q99853 325 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 PRRG3Q9BZD7 231 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 SYT4Q9H2B2 425 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 OBP2BQ9NPH6 170 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 SLC17A5Q9NRA2 495 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 FKBP7Q9Y680 259 aa11.68□□□□□ -0.54
COL4A6-207ENST00000487645 PKDREJQ9NTG1 2253 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 IGKV1D-43A0A0B4J1Z2 117 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 SH3D21A4FU49 640 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 H7C1C5 153 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 SURF4O15260 269 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 SLC16A7O60669 478 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 RAD51DO75771 328 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 SLC2A10O95528 541 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 OR8G3PP0DMU2 310 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 EPXP11678 715 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 ZNF3P17036 446 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 EPHA2P29317 976 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 POLR2IP36954 125 aaKnown RBP11.67□□□□□ -0.54
COL4A6-207ENST00000487645 SLC25A1P53007 311 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 LCN6P62502 163 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 MRPS34P82930 218 aaKnown RBP11.67□□□□□ -0.54
COL4A6-207ENST00000487645 FMODQ06828 376 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 LRRC36Q1X8D7 754 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 C12orf73Q69YU5 71 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 MEX3BQ6ZN04 569 aaKnown RBP11.67□□□□□ -0.54
COL4A6-207ENST00000487645 ZNF813Q6ZN06 617 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 FOXL2NBQ6ZUU3 175 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 ZBTB46Q86UZ6 589 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 OR6V1Q8N148 313 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 SLC22A24Q8N4F4 322 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 IQCF1Q8N6M8 205 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 WDR31Q8NA23 367 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 SDR9C7Q8NEX9 313 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 FAM222BQ8WU58 562 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 NSMAFQ92636 917 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 SLC38A2Q96QD8 506 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 MED18Q9BUE0 208 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 GRIP2Q9C0E4 1043 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 NUAK2Q9H093 628 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 RIBC2Q9H4K1 309 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 SIAEQ9HAT2 523 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 SRA1Q9HD15 236 aaKnown RBP11.67□□□□□ -0.54
COL4A6-207ENST00000487645 TMEM38BQ9NVV0 291 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 PLEKHB1Q9UF11 243 aaPredicted RBP11.67□□□□□ -0.54
COL4A6-207ENST00000487645 B9D1Q9UPM9 204 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 AMDHD2Q9Y303 409 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 UGT2A1Q9Y4X1 527 aa11.67□□□□□ -0.54
COL4A6-207ENST00000487645 ANKHD1Q8IWZ3 2542 aaKnown RBP11.66□□□□□ -0.54
COL4A6-207ENST00000487645 ARPC4-TTLL3A0A0A6YYG9 625 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 E9PQ18 207 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 FARS2O95363 451 aaKnown RBP11.66□□□□□ -0.54
COL4A6-207ENST00000487645 ATP6V1G2O95670 118 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 WNT11O96014 354 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 CTLA4P16410 223 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 PAICSP22234 425 aaKnown RBP11.66□□□□□ -0.54
COL4A6-207ENST00000487645 PEX2P28328 305 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 HOXC12P31275 282 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 EFNB1P98172 346 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 CRMP1Q14194 572 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 ETFDHQ16134 617 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 TBRG1Q3YBR2 411 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 FAM27BQ5VT28 67 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms