RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 PRKAB2O43741 272 aa1.12□□□□□ -2.23
RBM39-234ENST00000487604 SEC22BO75396 215 aa1.12□□□□□ -2.23
RBM39-234ENST00000487604 DCKP27707 260 aa1.12□□□□□ -2.23
RBM39-234ENST00000487604 OPRD1P41143 372 aa1.12□□□□□ -2.23
RBM39-234ENST00000487604 RFX3P48380 749 aa1.12□□□□□ -2.23
RBM39-234ENST00000487604 SCGB2A2Q13296 93 aa1.12□□□□□ -2.23
RBM39-234ENST00000487604 MAB21L1Q13394 359 aa1.12□□□□□ -2.23
RBM39-234ENST00000487604 MESDQ14696 234 aa1.12□□□□□ -2.23
RBM39-234ENST00000487604 GANABQ14697 944 aaKnown RBP1.12□□□□□ -2.23
RBM39-234ENST00000487604 SNRNP35Q16560 246 aaKnown RBP1.12□□□□□ -2.23
RBM39-234ENST00000487604 TATDN3Q17R31 274 aa1.12□□□□□ -2.23
RBM39-234ENST00000487604 SMARCD3Q6STE5 483 aa1.12□□□□□ -2.23
RBM39-234ENST00000487604 Q6ZS52 159 aa1.12□□□□□ -2.23
RBM39-234ENST00000487604 CCDC80Q76M96 950 aa1.12□□□□□ -2.23
RBM39-234ENST00000487604 ECHDC2Q86YB7 292 aa1.12□□□□□ -2.23
RBM39-234ENST00000487604 VSTM4Q8IW00 320 aa1.12□□□□□ -2.23
RBM39-234ENST00000487604 DNAJC1Q96KC8 554 aaKnown RBP1.12□□□□□ -2.23
RBM39-234ENST00000487604 MS4A4EQ96PG1 132 aa1.12□□□□□ -2.23
RBM39-234ENST00000487604 CLCC1Q96S66 551 aa1.12□□□□□ -2.23
RBM39-234ENST00000487604 SH3GL3Q99963 347 aa1.12□□□□□ -2.23
RBM39-234ENST00000487604 TM2D3Q9BRN9 247 aa1.12□□□□□ -2.23
RBM39-234ENST00000487604 PARP12Q9H0J9 701 aaKnown RBP1.12□□□□□ -2.23
RBM39-234ENST00000487604 CTSFQ9UBX1 484 aa1.12□□□□□ -2.23
RBM39-234ENST00000487604 RPH3ALQ9UNE2 315 aa1.12□□□□□ -2.23
RBM39-234ENST00000487604 TRAV39A0A0B4J263 110 aa1.11□□□□□ -2.23
RBM39-234ENST00000487604 DIRAS1O95057 198 aa1.11□□□□□ -2.23
RBM39-234ENST00000487604 MFN2O95140 757 aa1.11□□□□□ -2.23
RBM39-234ENST00000487604 IL10P22301 178 aa1.11□□□□□ -2.23
RBM39-234ENST00000487604 AQP2P41181 271 aa1.11□□□□□ -2.23
RBM39-234ENST00000487604 PRKCDQ05655 676 aa1.11□□□□□ -2.23
RBM39-234ENST00000487604 IFT88Q13099 833 aa1.11□□□□□ -2.23
RBM39-234ENST00000487604 PON2Q15165 354 aa1.11□□□□□ -2.23
RBM39-234ENST00000487604 RBMY1FQ15415 496 aaKnown RBP1.11□□□□□ -2.23
RBM39-234ENST00000487604 RGNQ15493 299 aa1.11□□□□□ -2.23
RBM39-234ENST00000487604 AP1ARQ63HQ0 302 aa1.11□□□□□ -2.23
RBM39-234ENST00000487604 TRIM40Q6P9F5 258 aa1.11□□□□□ -2.23
RBM39-234ENST00000487604 ARL9Q6T311 187 aa1.11□□□□□ -2.23
RBM39-234ENST00000487604 PEX26Q7Z412 305 aa1.11□□□□□ -2.23
RBM39-234ENST00000487604 CEP112Q8N8E3 955 aa1.11□□□□□ -2.23
RBM39-234ENST00000487604 ZNF557Q8N988 423 aaPredicted RBP1.11□□□□□ -2.23
RBM39-234ENST00000487604 APCDD1LQ8NCL9 501 aa1.11□□□□□ -2.23
RBM39-234ENST00000487604 OR5M1Q8NGP8 315 aa1.11□□□□□ -2.23
RBM39-234ENST00000487604 TGM7Q96PF1 710 aa1.11□□□□□ -2.23
RBM39-234ENST00000487604 RARRES2Q99969 163 aa1.11□□□□□ -2.23
RBM39-234ENST00000487604 TMEM59Q9BXS4 323 aa1.11□□□□□ -2.23
RBM39-234ENST00000487604 LRRN3Q9H3W5 708 aa1.11□□□□□ -2.23
RBM39-234ENST00000487604 TRIM64A6NGJ6 449 aa1.1□□□□□ -2.23
RBM39-234ENST00000487604 TRIM64BA6NI03 449 aa1.1□□□□□ -2.23
RBM39-234ENST00000487604 MED7O43513 233 aa1.1□□□□□ -2.23
RBM39-234ENST00000487604 TOM1O60784 492 aa1.1□□□□□ -2.23
RBM39-234ENST00000487604 TBX19O60806 448 aa1.1□□□□□ -2.23
RBM39-234ENST00000487604 UTS2O95399 124 aa1.1□□□□□ -2.23
RBM39-234ENST00000487604 UBTFL6P0CB48 400 aaPredicted RBP1.1□□□□□ -2.23
RBM39-234ENST00000487604 LAP3P28838 519 aa1.1□□□□□ -2.23
RBM39-234ENST00000487604 CA8P35219 290 aa1.1□□□□□ -2.23
RBM39-234ENST00000487604 RDXP35241 583 aaKnown RBP1.1□□□□□ -2.23
RBM39-234ENST00000487604 HRH1P35367 487 aa1.1□□□□□ -2.23
RBM39-234ENST00000487604 CEACAM6P40199 344 aa1.1□□□□□ -2.23
RBM39-234ENST00000487604 RPL13AP40429 203 aaKnown RBP1.1□□□□□ -2.23
RBM39-234ENST00000487604 RBX1P62877 108 aa1.1□□□□□ -2.23
RBM39-234ENST00000487604 SELPLGQ14242 412 aa1.1□□□□□ -2.23
RBM39-234ENST00000487604 C10orf120Q5SQS8 335 aa1.1□□□□□ -2.23
RBM39-234ENST00000487604 PUSL1Q8N0Z8 303 aaKnown RBP1.1□□□□□ -2.23
RBM39-234ENST00000487604 ZNF680Q8NEM1 530 aa1.1□□□□□ -2.23
RBM39-234ENST00000487604 FAM110BQ8TC76 370 aa1.1□□□□□ -2.23
RBM39-234ENST00000487604 CTNNBL1Q8WYA6 563 aaPredicted RBP1.1□□□□□ -2.23
RBM39-234ENST00000487604 CXorf40BQ96DE9 158 aa1.1□□□□□ -2.23
RBM39-234ENST00000487604 GORASP2Q9H8Y8 452 aa1.1□□□□□ -2.23
RBM39-234ENST00000487604 FN3KRPQ9HA64 309 aa1.1□□□□□ -2.23
RBM39-234ENST00000487604 SGK2Q9HBY8 427 aa1.1□□□□□ -2.23
RBM39-234ENST00000487604 IKBKGQ9Y6K9 419 aa1.1□□□□□ -2.23
RBM39-234ENST00000487604 MAPK13O15264 365 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 POLR2DO15514 142 aaKnown RBP1.09□□□□□ -2.23
RBM39-234ENST00000487604 SOCS1O15524 211 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 CLDN3O15551 220 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 RAMP3O60896 148 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 RAB3DO95716 219 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 IGHV2-5P01817 119 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 FGF1P05230 155 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 IL1RNP18510 177 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 RORCP51449 518 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 OGDHQ02218 1023 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 TNFRSF9Q07011 255 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 FUT5Q11128 374 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 TEX43Q6ZNM6 134 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 TMEM136Q6ZRR5 245 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 ASCL5Q7RTU5 278 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 NUDCD3Q8IVD9 361 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 TMEM54Q969K7 222 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 SORT1Q99523 831 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 RPF2Q9H7B2 306 aaKnown RBP1.09□□□□□ -2.23
RBM39-234ENST00000487604 HOOK1Q9UJC3 728 aaKnown RBP1.09□□□□□ -2.23
RBM39-234ENST00000487604 SIGLEC7Q9Y286 467 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 U3KQV3 271 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 SCN4AP35499 1836 aa1.09□□□□□ -2.23
RBM39-234ENST00000487604 PNPLA6Q8IY17 1366 aa1.08□□□□□ -2.24
RBM39-234ENST00000487604 RPAP1Q9BWH6 1393 aaPredicted RBP1.08□□□□□ -2.24
RBM39-234ENST00000487604 A0A0B4J2A0 478 aa1.08□□□□□ -2.24
RBM39-234ENST00000487604 KRT87PA6NCN2 255 aa1.08□□□□□ -2.24
RBM39-234ENST00000487604 A8MUI8 341 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms