RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 GTPBP8Q8N3Z3 284 aaPredicted RBP2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 LIX1Q8N485 282 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 ACTRT1Q8TDG2 376 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 CD300LFQ8TDQ1 290 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 CXorf40AQ8TE69 158 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 TMEM158Q8WZ71 300 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 ELMO1Q92556 727 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 ITFG2Q969R8 447 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 LRRC58Q96CX6 371 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 DNAJC19Q96DA6 116 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 CCDC126Q96EE4 140 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 ZNF578Q96N58 590 aaPredicted RBP2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 ATP5SQ99766 215 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 HDHD3Q9BSH5 251 aaPredicted RBP2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 GABARAPL3Q9BY60 117 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 SLC25A39Q9BZJ4 359 aaPredicted RBP2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 FAM192AQ9GZU8 254 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 CWH43Q9H720 699 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 SLCO1B3Q9NPD5 702 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 CHMP5Q9NZZ3 219 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 LSM7Q9UK45 103 aaKnown RBP2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 WSB1Q9Y6I7 421 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 V9GYY5 206 aaPredicted RBP2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 SMARCA2P51531 1590 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 CNTNAP1P78357 1384 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 KTN1Q86UP2 1357 aaKnown RBP2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 CEMIPQ8WUJ3 1361 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 MAP3K15Q6ZN16 1313 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 RAD50Q92878 1312 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 TRAV39A0A0B4J263 110 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 GOLGA6L10A6NI86 522 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 TCP11X1B4DZS4 312 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 CDC7O00311 574 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 CLOCKO15516 846 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 EEDO75530 441 aaKnown RBP2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 C6orf47O95873 294 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 KRT14P02533 472 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 BGLAPP02818 100 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 IVLP07476 585 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 TPM1P09493 284 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 ZDHHC11BP0C7U3 371 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 TOP1P11387 765 aaKnown RBP2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 ZNF30P17039 623 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 AK4P27144 223 aaPredicted RBP2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 CASQ1P31415 396 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 FOXN2P32314 431 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 NAA10P41227 235 aaPredicted RBP2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 CXCL5P42830 114 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 MECOMQ03112 1051 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 TGM3Q08188 693 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 ECH1Q13011 328 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 TMED1Q13445 227 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 TMEM183BQ1AE95 376 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 TTLL9Q3SXZ7 439 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 LRRC66Q68CR7 880 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 LINC00173Q6ZV60 143 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 TMEM179Q6ZVK1 233 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 CENPQQ7L2Z9 268 aaPredicted RBP2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 TMEM183AQ8IXX5 376 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 KRT222Q8N1A0 295 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 MREGQ8N565 214 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 HSD17B11Q8NBQ5 300 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 FBXL13Q8NEE6 735 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 SRSF12Q8WXF0 261 aaKnown RBP2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 KIFAP3Q92845 792 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 SLC38A4Q969I6 547 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 PIK3IP1Q96FE7 263 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 CFAP53Q96M91 514 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 TSNARE1Q96NA8 513 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 TSSK3Q96PN8 268 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 P2RX4Q99571 388 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 RACGAP1Q9H0H5 632 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 CDC42EP4Q9H3Q1 356 aaKnown RBP2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 RPF2Q9H7B2 306 aaKnown RBP2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 ING4Q9UNL4 249 aa2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 F11RQ9Y624 299 aaKnown RBP2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 VIRMAQ69YN4 1812 aaKnown RBP2.28□□□□□ -2.04
SNRNP27-204ENST00000487029 NFASCO94856 1347 aa2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 MAPK8IP3Q9UPT6 1336 aa2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 PLAC8L1A1L4L8 177 aa2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 LRRIQ3A6PVS8 624 aaPredicted RBP2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 GOLGA6L19H0YKK7 550 aa2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 SGK1O00141 431 aa2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 RAB29O14966 203 aa2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 MRPS12O15235 138 aaKnown RBP2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 SS18L1O75177 396 aaPredicted RBP2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 CLIC3O95833 236 aa2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 TSPAN13O95857 204 aa2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 IGLV2-23P01705 113 aa2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 FTH1P02794 183 aa2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 PLEKP08567 350 aaPredicted RBP2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 CALM1P0DP23 149 aa2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 CALM2P0DP24 149 aa2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 CALM3P0DP25 149 aa2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 FOLR1P15328 257 aa2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 HOXA9P31269 272 aa2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 RRM2P31350 389 aa2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 PEX19P40855 299 aa2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 CDKN1BP46527 198 aa2.27□□□□□ -2.05
SNRNP27-204ENST00000487029 RFX3P48380 749 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms