RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 ASB10Q8WXI3 467 aa21.06■□□□□ 0.96
LIME1-206ENST00000487026 HPS1Q92902 700 aa21.06■□□□□ 0.96
LIME1-206ENST00000487026 INIPQ9NRY2 104 aa21.06■□□□□ 0.96
LIME1-206ENST00000487026 A0A1W2PPW3 197 aa21.05■□□□□ 0.96
LIME1-206ENST00000487026 ACADSP16219 412 aa21.05■□□□□ 0.96
LIME1-206ENST00000487026 RBM34P42696 430 aaKnown RBP21.05■□□□□ 0.96
LIME1-206ENST00000487026 ZNF84P51523 738 aa21.05■□□□□ 0.96
LIME1-206ENST00000487026 ERVS71-1P61550 626 aa21.05■□□□□ 0.96
LIME1-206ENST00000487026 LRRC23Q53EV4 343 aaPredicted RBP21.05■□□□□ 0.96
LIME1-206ENST00000487026 CYBRD1Q53TN4 286 aa21.05■□□□□ 0.96
LIME1-206ENST00000487026 COQ5Q5HYK3 327 aa21.05■□□□□ 0.96
LIME1-206ENST00000487026 RGS7BPQ6MZT1 257 aaPredicted RBP21.05■□□□□ 0.96
LIME1-206ENST00000487026 NOXO1Q8NFA2 376 aa21.05■□□□□ 0.96
LIME1-206ENST00000487026 NARFLQ9H6Q4 476 aa21.05■□□□□ 0.96
LIME1-206ENST00000487026 CDH20Q9HBT6 801 aa21.05■□□□□ 0.96
LIME1-206ENST00000487026 PIP5K1CO60331 668 aa21.04■□□□□ 0.96
LIME1-206ENST00000487026 ENTPD5O75356 428 aa21.04■□□□□ 0.96
LIME1-206ENST00000487026 SLC2A10O95528 541 aa21.04■□□□□ 0.96
LIME1-206ENST00000487026 NPPAP01160 153 aa21.04■□□□□ 0.96
LIME1-206ENST00000487026 VIMP08670 466 aaKnown RBP21.04■□□□□ 0.96
LIME1-206ENST00000487026 THBS2P35442 1172 aa21.04■□□□□ 0.96
LIME1-206ENST00000487026 SLC36A2Q495M3 483 aa21.04■□□□□ 0.96
LIME1-206ENST00000487026 ERICH5Q6P6B1 374 aa21.04■□□□□ 0.96
LIME1-206ENST00000487026 YIPF5Q969M3 257 aa21.04■□□□□ 0.96
LIME1-206ENST00000487026 TPD52L3Q96J77 140 aa21.04■□□□□ 0.96
LIME1-206ENST00000487026 TSPAN32Q96QS1 320 aa21.04■□□□□ 0.96
LIME1-206ENST00000487026 TAAR3PQ9P1P4 343 aa21.04■□□□□ 0.96
LIME1-206ENST00000487026 BBIP1A8MTZ0 92 aa21.03■□□□□ 0.96
LIME1-206ENST00000487026 NCR1O76036 304 aa21.03■□□□□ 0.96
LIME1-206ENST00000487026 IFNA14P01570 189 aa21.03■□□□□ 0.96
LIME1-206ENST00000487026 LCKP06239 509 aa21.03■□□□□ 0.96
LIME1-206ENST00000487026 CDAP32320 146 aa21.03■□□□□ 0.96
LIME1-206ENST00000487026 KDELR2P33947 212 aa21.03■□□□□ 0.96
LIME1-206ENST00000487026 CDH15P55291 814 aa21.03■□□□□ 0.96
LIME1-206ENST00000487026 NKPD1Q17RQ9 610 aa21.03■□□□□ 0.96
LIME1-206ENST00000487026 ARMC4Q5T2S8 1044 aa21.03■□□□□ 0.96
LIME1-206ENST00000487026 RDH5Q92781 318 aa21.03■□□□□ 0.96
LIME1-206ENST00000487026 SEPHS2Q99611 448 aa21.03■□□□□ 0.96
LIME1-206ENST00000487026 POLR2J2Q9GZM3 115 aaKnown RBP21.03■□□□□ 0.96
LIME1-206ENST00000487026 POLR2J3Q9H1A7 115 aaKnown RBP21.03■□□□□ 0.96
LIME1-206ENST00000487026 GMPR2Q9P2T1 348 aaKnown RBP21.03■□□□□ 0.96
LIME1-206ENST00000487026 TMEFF2Q9UIK5 374 aaPredicted RBP21.03■□□□□ 0.96
LIME1-206ENST00000487026 MED31Q9Y3C7 131 aa21.03■□□□□ 0.96
LIME1-206ENST00000487026 TSPAN19P0C672 248 aa21.02■□□□□ 0.96
LIME1-206ENST00000487026 FUT4P22083 530 aa21.02■□□□□ 0.96
LIME1-206ENST00000487026 GPR6P46095 362 aaPredicted RBP21.02■□□□□ 0.96
LIME1-206ENST00000487026 DAP3P51398 398 aaKnown RBP21.02■□□□□ 0.96
LIME1-206ENST00000487026 PLP2Q04941 152 aa21.02■□□□□ 0.96
LIME1-206ENST00000487026 FMODQ06828 376 aa21.02■□□□□ 0.96
LIME1-206ENST00000487026 MAPRE2Q15555 327 aa21.02■□□□□ 0.96
LIME1-206ENST00000487026 DPPA2Q7Z7J5 298 aa21.02■□□□□ 0.96
LIME1-206ENST00000487026 ICA1LQ8NDH6 482 aa21.02■□□□□ 0.96
LIME1-206ENST00000487026 RBM15BQ8NDT2 890 aaKnown RBP21.02■□□□□ 0.96
LIME1-206ENST00000487026 HDAC2Q92769 488 aaKnown RBP21.02■□□□□ 0.96
LIME1-206ENST00000487026 GID8Q9NWU2 228 aa21.02■□□□□ 0.96
LIME1-206ENST00000487026 ZNF346Q9UL40 294 aaKnown RBP21.02■□□□□ 0.96
LIME1-206ENST00000487026 IGKV1D-43A0A0B4J1Z2 117 aa21.01■□□□□ 0.95
LIME1-206ENST00000487026 IQCMA0A1B0GVH7 501 aa21.01■□□□□ 0.95
LIME1-206ENST00000487026 SLC22A23A1A5C7 686 aa21.01■□□□□ 0.95
LIME1-206ENST00000487026 FAM220BPB1ANY3 271 aa21.01■□□□□ 0.95
LIME1-206ENST00000487026 WNT9BO14905 357 aa21.01■□□□□ 0.95
LIME1-206ENST00000487026 MMP7P09237 267 aaPredicted RBP21.01■□□□□ 0.95
LIME1-206ENST00000487026 MAGEB1P43366 347 aa21.01■□□□□ 0.95
LIME1-206ENST00000487026 YAP1P46937 504 aaKnown RBP21.01■□□□□ 0.95
LIME1-206ENST00000487026 TBC1D28Q2M2D7 210 aa21.01■□□□□ 0.95
LIME1-206ENST00000487026 C10orf128Q5T292 105 aa21.01■□□□□ 0.95
LIME1-206ENST00000487026 MEX3DQ86XN8 651 aaKnown RBP21.01■□□□□ 0.95
LIME1-206ENST00000487026 POU5F2Q8N7G0 328 aa21.01■□□□□ 0.95
LIME1-206ENST00000487026 PCYOX1LQ8NBM8 494 aa21.01■□□□□ 0.95
LIME1-206ENST00000487026 CPEB3Q8NE35 698 aaKnown RBP21.01■□□□□ 0.95
LIME1-206ENST00000487026 OR2T12Q8NG77 320 aa21.01■□□□□ 0.95
LIME1-206ENST00000487026 CLDND2Q8NHS1 167 aa21.01■□□□□ 0.95
LIME1-206ENST00000487026 SYNPRQ8TBG9 265 aa21.01■□□□□ 0.95
LIME1-206ENST00000487026 LIPHQ8WWY8 451 aa21.01■□□□□ 0.95
LIME1-206ENST00000487026 NSMAFQ92636 917 aa21.01■□□□□ 0.95
LIME1-206ENST00000487026 C1orf159Q96HA4 380 aa21.01■□□□□ 0.95
LIME1-206ENST00000487026 ZNF275Q9NSD4 429 aaPredicted RBP21.01■□□□□ 0.95
LIME1-206ENST00000487026 UGT2A1Q9Y4X1 527 aa21.01■□□□□ 0.95
LIME1-206ENST00000487026 CENPBD1B2RD01 187 aa21■□□□□ 0.95
LIME1-206ENST00000487026 IGF2P01344 180 aa21■□□□□ 0.95
LIME1-206ENST00000487026 THRBP10828 461 aa21■□□□□ 0.95
LIME1-206ENST00000487026 ACHEP22303 614 aa21■□□□□ 0.95
LIME1-206ENST00000487026 CCNOP22674 350 aa21■□□□□ 0.95
LIME1-206ENST00000487026 ZNF133P52736 654 aaPredicted RBP21■□□□□ 0.95
LIME1-206ENST00000487026 UCP2P55851 309 aa21■□□□□ 0.95
LIME1-206ENST00000487026 KLF3P57682 345 aaPredicted RBP21■□□□□ 0.95
LIME1-206ENST00000487026 HSF2Q03933 536 aa21■□□□□ 0.95
LIME1-206ENST00000487026 TOP3AQ13472 1001 aaPredicted RBP21■□□□□ 0.95
LIME1-206ENST00000487026 SGCAQ16586 387 aa21■□□□□ 0.95
LIME1-206ENST00000487026 NRN1LQ496H8 165 aa21■□□□□ 0.95
LIME1-206ENST00000487026 PABPC1L2AQ5JQF8 200 aa21■□□□□ 0.95
LIME1-206ENST00000487026 HDDC2Q7Z4H3 204 aa21■□□□□ 0.95
LIME1-206ENST00000487026 MICU2Q8IYU8 434 aa21■□□□□ 0.95
LIME1-206ENST00000487026 OR1J2Q8NGS2 313 aa21■□□□□ 0.95
LIME1-206ENST00000487026 C11orf40Q8WZ69 217 aa21■□□□□ 0.95
LIME1-206ENST00000487026 C19orf24Q9BVV8 132 aa21■□□□□ 0.95
LIME1-206ENST00000487026 TXNIPQ9H3M7 391 aa21■□□□□ 0.95
LIME1-206ENST00000487026 C1orf198Q9H425 327 aa21■□□□□ 0.95
LIME1-206ENST00000487026 SIAEQ9HAT2 523 aa21■□□□□ 0.95
LIME1-206ENST00000487026 MRGBPQ9NV56 204 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms