RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 TMEM185BQ9H7F4 350 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 UGT1A7Q9HAW7 530 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 UGT1A10Q9HAW8 530 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 UGT1A8Q9HAW9 530 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 FGF20Q9NP95 211 aaPredicted RBP3.04□□□□□ -1.92
SMC4-218ENST00000486711 SLCO1B3Q9NPD5 702 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 STOX2Q9P2F5 926 aaPredicted RBP3.04□□□□□ -1.92
SMC4-218ENST00000486711 ING4Q9UNL4 249 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 NEU3Q9UQ49 428 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 TP53TG5Q9Y2B4 290 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 CIB4A0PJX0 185 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 FAM166BA8MTA8 275 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 F6UB75 175 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 PANO1I0J062 215 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 PES1O00541 588 aaKnown RBP3.03□□□□□ -1.92
SMC4-218ENST00000486711 SUPT3HO75486 399 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 ZDHHC11BP0C7U3 371 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 MDKP21741 143 aaPredicted RBP3.03□□□□□ -1.92
SMC4-218ENST00000486711 SLC1A1P43005 524 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 RPS10P46783 165 aaKnown RBP3.03□□□□□ -1.92
SMC4-218ENST00000486711 RAB10P61026 200 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 RPS15P62841 145 aaKnown RBP3.03□□□□□ -1.92
SMC4-218ENST00000486711 TCP10Q12799 353 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 TMEM183BQ1AE95 376 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 PIGGQ5H8A4 983 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 VAX1Q5SQQ9 334 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 BZW1Q7L1Q6 419 aaKnown RBP3.03□□□□□ -1.92
SMC4-218ENST00000486711 SLC16A14Q7RTX9 510 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 LUZP2Q86TE4 346 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 OAFQ86UD1 273 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 TMEM183AQ8IXX5 376 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 MDS2Q8NDY4 140 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 FBXL13Q8NEE6 735 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 OR52K2Q8NGK3 314 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 OR4A4PQ8NGN8 299 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 ZNF502Q8TBZ5 544 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 ACTRT1Q8TDG2 376 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 ASB9Q96DX5 294 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 PKNOX2Q96KN3 472 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 LINC00167Q96N53 147 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 TGS1Q96RS0 853 aaKnown RBP3.03□□□□□ -1.92
SMC4-218ENST00000486711 RACGAP1Q9H0H5 632 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 DNTTIP1Q9H147 329 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 CWH43Q9H720 699 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 ANKRA2Q9H9E1 313 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 ZNF331Q9NQX6 463 aaPredicted RBP3.03□□□□□ -1.92
SMC4-218ENST00000486711 KIAA1257Q9ULG3 409 aa3.03□□□□□ -1.92
SMC4-218ENST00000486711 NFASCO94856 1347 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 OR2AG2A6NM03 316 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 SIRPB1O00241 398 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 MRPS12O15235 138 aaKnown RBP3.02□□□□□ -1.93
SMC4-218ENST00000486711 TSPAN13O95857 204 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 BGLAPP02818 100 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 PCCAP05165 728 aaPredicted RBP3.02□□□□□ -1.93
SMC4-218ENST00000486711 ZNF30P17039 623 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 GALP22466 123 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 CDKN1BP46527 198 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 LHX2P50458 406 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 NUTF2P61970 127 aaKnown RBP3.02□□□□□ -1.93
SMC4-218ENST00000486711 IRX3P78415 501 aaPredicted RBP3.02□□□□□ -1.93
SMC4-218ENST00000486711 MERTKQ12866 999 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 CAPRIN1Q14444 709 aaKnown RBP3.02□□□□□ -1.93
SMC4-218ENST00000486711 TTLL9Q3SXZ7 439 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 PPM1LQ5SGD2 360 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 CCNJQ5T5M9 372 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 ZNF530Q6P9A1 599 aaPredicted RBP3.02□□□□□ -1.93
SMC4-218ENST00000486711 ABHD13Q7L211 337 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 EIF3MQ7L2H7 374 aaKnown RBP3.02□□□□□ -1.93
SMC4-218ENST00000486711 HSD17B11Q8NBQ5 300 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 CCDC148Q8NFR7 591 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 OR10R2Q8NGX6 335 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 CD300LFQ8TDQ1 290 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 TMEM158Q8WZ71 300 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 IL22RA2Q969J5 263 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 ZNF799Q96GE5 643 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 RNF185Q96GF1 192 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 EXO5Q9H790 373 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 DMAP1Q9NPF5 467 aaPredicted RBP3.02□□□□□ -1.93
SMC4-218ENST00000486711 GCNT4Q9P109 453 aa3.02□□□□□ -1.93
SMC4-218ENST00000486711 MAP3K15Q6ZN16 1313 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 CENPJQ9HC77 1338 aaPredicted RBP3.01□□□□□ -1.93
SMC4-218ENST00000486711 GLYATL1P3A0A0U1RQE8 302 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 ZNF816-ZNF321PA0A0X1KG74 233 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 HIDE1A8MVS5 230 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 WRBO00258 174 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 NDUFAB1O14561 156 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 DNALI1O14645 258 aaPredicted RBP3.01□□□□□ -1.93
SMC4-218ENST00000486711 KMOO15229 486 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 CLPXO76031 633 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 AIFM1O95831 613 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 C6orf47O95873 294 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 PSG2P11465 335 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 GTF2E2P29084 291 aaKnown RBP3.01□□□□□ -1.93
SMC4-218ENST00000486711 CXCL5P42830 114 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 CX3CR1P49238 355 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 UBE2AP49459 152 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 HMGCS1Q01581 520 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 SF3A2Q15428 464 aaKnown RBP3.01□□□□□ -1.93
SMC4-218ENST00000486711 CHRNA6Q15825 494 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 MRPL23Q16540 153 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms