RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 CDH26Q8IXH8 852 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 KCNG3Q8TAE7 436 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 PLPPR1Q8TBJ4 325 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 STARD8Q92502 1023 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 STMN2Q93045 179 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 AURKBQ96GD4 344 aaPredicted RBP1.71□□□□□ -2.14
GCFC2-209ENST00000486016 TSNARE1Q96NA8 513 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 MYCBPQ99417 103 aaPredicted RBP1.71□□□□□ -2.14
GCFC2-209ENST00000486016 ECSITQ9BQ95 431 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 TCHPQ9BT92 498 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 CDC42EP4Q9H3Q1 356 aaKnown RBP1.71□□□□□ -2.14
GCFC2-209ENST00000486016 SLCO1B3Q9NPD5 702 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 CTPS2Q9NRF8 586 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 SLC2A8Q9NY64 477 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 ZNF226Q9NYT6 803 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 PCYOX1Q9UHG3 505 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 CTNNA3Q9UI47 895 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 GNPTGQ9UJJ9 305 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 RABL2BQ9UNT1 228 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 CSDC2Q9Y534 153 aaKnown RBP1.71□□□□□ -2.14
GCFC2-209ENST00000486016 F11RQ9Y624 299 aaKnown RBP1.71□□□□□ -2.14
GCFC2-209ENST00000486016 A0A1B0GVI7 797 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 FAM47DPA6NHR8 397 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 TRIM64CA6NLI5 447 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 ZNF716A6NP11 495 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 COLCA2A8K830 154 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 H3BNH8 94 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 SS18L1O75177 396 aaPredicted RBP1.7□□□□□ -2.14
GCFC2-209ENST00000486016 EIF3GO75821 320 aaKnown RBP eCLIP1.7□□□□□ -2.14
GCFC2-209ENST00000486016 IGLV2-23P01705 113 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 FGGP02679 453 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 CRYGBP07316 175 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 MRPL3P09001 348 aaKnown RBP1.7□□□□□ -2.14
GCFC2-209ENST00000486016 ZNF735P0CB33 412 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 PNMA6AP0CW24 399 aaPredicted RBP1.7□□□□□ -2.14
GCFC2-209ENST00000486016 ZNF43P17038 809 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 TNNI1P19237 187 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 HOXA9P31269 272 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 CXCL5P42830 114 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 RORCP51449 518 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 CCR8P51685 355 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 UGT2B15P54855 530 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 GPX6P59796 221 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 RPS21P63220 83 aaKnown RBP1.7□□□□□ -2.14
GCFC2-209ENST00000486016 ACTA1P68133 377 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 ZNF92Q03936 586 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 LRRC74AQ0VAA2 488 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 SMARCB1Q12824 385 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 TMEM183BQ1AE95 376 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 DEFB116Q30KQ4 102 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 ZBED5Q49AG3 693 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 TMEM255AQ5JRV8 349 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 COA6Q5JTJ3 125 aaKnown RBP1.7□□□□□ -2.14
GCFC2-209ENST00000486016 VAX1Q5SQQ9 334 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 CCDC183Q5T5S1 534 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 NIPA1Q7RTP0 329 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 HMGN2P46Q86SG4 172 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 TMEM183AQ8IXX5 376 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 MS4A15Q8N5U1 240 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 HSD17B11Q8NBQ5 300 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 SPATA4Q8NEY3 305 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 B3GNT7Q8NFL0 401 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 OR10G2Q8NGC3 310 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 ACTRT1Q8TDG2 376 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 RNF139Q8WU17 664 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 GIMAP1Q8WWP7 306 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 GEMIN6Q8WXD5 167 aaKnown RBP1.7□□□□□ -2.14
GCFC2-209ENST00000486016 TMEM54Q969K7 222 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 DNAJC19Q96DA6 116 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 ASB9Q96DX5 294 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 CNDP1Q96KN2 507 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 GABARAPL3Q9BY60 117 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 LHX9Q9NQ69 397 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 PSMC3IPQ9P2W1 217 aaPredicted RBP1.7□□□□□ -2.14
GCFC2-209ENST00000486016 NUP50Q9UKX7 468 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 STARD10Q9Y365 291 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 CEMIPQ8WUJ3 1361 aa1.7□□□□□ -2.14
GCFC2-209ENST00000486016 ITGB4P16144 1822 aa1.69□□□□□ -2.14
GCFC2-209ENST00000486016 IGLV2-18A0A075B6J9 118 aa1.69□□□□□ -2.14
GCFC2-209ENST00000486016 PLAC8L1A1L4L8 177 aa1.69□□□□□ -2.14
GCFC2-209ENST00000486016 HEATR9A2RTY3 570 aa1.69□□□□□ -2.14
GCFC2-209ENST00000486016 PRSS37A4D1T9 235 aa1.69□□□□□ -2.14
GCFC2-209ENST00000486016 GOLGA8OA6NCC3 632 aa1.69□□□□□ -2.14
GCFC2-209ENST00000486016 C11orf94C9JXX5 98 aa1.69□□□□□ -2.14
GCFC2-209ENST00000486016 GOLGA8NF8WBI6 632 aa1.69□□□□□ -2.14
GCFC2-209ENST00000486016 AP3B1O00203 1094 aa1.69□□□□□ -2.14
GCFC2-209ENST00000486016 XKRYO14609 159 aa1.69□□□□□ -2.14
GCFC2-209ENST00000486016 PPP1R2P9O14990 202 aa1.69□□□□□ -2.14
GCFC2-209ENST00000486016 CD5LO43866 347 aa1.69□□□□□ -2.14
GCFC2-209ENST00000486016 CIB2O75838 187 aa1.69□□□□□ -2.14
GCFC2-209ENST00000486016 BGLAPP02818 100 aa1.69□□□□□ -2.14
GCFC2-209ENST00000486016 FOLR1P15328 257 aa1.69□□□□□ -2.14
GCFC2-209ENST00000486016 ZNF30P17039 623 aa1.69□□□□□ -2.14
GCFC2-209ENST00000486016 CDKN1BP46527 198 aa1.69□□□□□ -2.14
GCFC2-209ENST00000486016 RFX3P48380 749 aa1.69□□□□□ -2.14
GCFC2-209ENST00000486016 NCBP2P52298 156 aaKnown RBP eCLIP1.69□□□□□ -2.14
GCFC2-209ENST00000486016 MRPS22P82650 360 aaKnown RBP1.69□□□□□ -2.14
GCFC2-209ENST00000486016 VPS26BQ4G0F5 336 aa1.69□□□□□ -2.14
GCFC2-209ENST00000486016 Q6ZSR3 168 aa1.69□□□□□ -2.14
GCFC2-209ENST00000486016 TMEM135Q86UB9 458 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms