RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 IQCMA0A1B0GVH7 501 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 A0A1W2PPL8 197 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 SH3PXD2BA1X283 911 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 ZNF503-AS2A6NEH8 195 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 H7C1Q1 480 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 GYG2O15488 501 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 MGRN1O60291 552 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 SEMG1P04279 462 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 CD14P08571 375 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 OR4A8P0C604 315 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 T-ENOLP0DO92 83 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 FOSL1P15407 271 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 NPR2P20594 1047 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 ATP6V1B2P21281 511 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 CDAP32320 146 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 NUDT6P53370 316 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 SNRPD2P62316 118 aaKnown RBP10.86□□□□□ -0.67
PTCD1-205ENST00000485746 TRIM25Q14258 630 aaKnown RBP10.86□□□□□ -0.67
PTCD1-205ENST00000485746 SEC23BQ15437 767 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 HIST3H3Q16695 136 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 FAM98BQ52LJ0 330 aaKnown RBP10.86□□□□□ -0.67
PTCD1-205ENST00000485746 KRT80Q6KB66 452 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 ARIH2OSQ8N7S6 290 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 LRRC75AQ8NAA5 344 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 GNPDA2Q8TDQ7 276 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 MS4A3Q96HJ5 214 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 C18orf12Q96KH6 178 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 ZNF570Q96NI8 536 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 KCNK17Q96T54 332 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 GRIP2Q9C0E4 1043 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 C1orf21Q9H246 121 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 LRMDAQ9H2I8 198 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 RERGLQ9H628 205 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 CDH20Q9HBT6 801 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 GDF2Q9UK05 429 aaPredicted RBP10.86□□□□□ -0.67
PTCD1-205ENST00000485746 OTOGQ6ZRI0 2925 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 SPG11Q96JI7 2443 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 PRRC2AP48634 2157 aaKnown RBP10.86□□□□□ -0.67
PTCD1-205ENST00000485746 MYO9AB2RTY4 2548 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 TRIM64A6NGJ6 449 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 TRIM64BA6NI03 449 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 B9A039 149 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 H7C1C5 153 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 TNFRSF11BO00300 401 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 SSX4O60224 188 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 KRT36O76013 467 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 UBOX5O94941 541 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 INHBBP09529 407 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 APLNRP35414 380 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 THBS4P35443 961 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 OMPP47874 163 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 RPS6KA3P51812 740 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 LCN6P62502 163 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 FMODQ06828 376 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 SNTB2Q13425 540 aaKnown RBP10.85□□□□□ -0.67
PTCD1-205ENST00000485746 ETFDHQ16134 617 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 DNAL1Q4LDG9 190 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 C10orf128Q5T292 105 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 SLC25A47Q6Q0C1 308 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 MYPOPQ86VE0 399 aaPredicted RBP10.85□□□□□ -0.67
PTCD1-205ENST00000485746 KRTAP1-3Q8IUG1 177 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 NUP37Q8NFH4 326 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 OR1J2Q8NGS2 313 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 FGFBP3Q8TAT2 258 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 ZNF519Q8TB69 540 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 POP5Q969H6 163 aaKnown RBP10.85□□□□□ -0.67
PTCD1-205ENST00000485746 CLPTM1LQ96KA5 538 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 DHRS1Q96LJ7 313 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 Q96M85 177 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 VRK1Q99986 396 aaPredicted RBP10.85□□□□□ -0.67
PTCD1-205ENST00000485746 SIAEQ9HAT2 523 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 SMURF2Q9HAU4 748 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 NOX3Q9HBY0 568 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 TAS2R1Q9NYW7 299 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 IL20RAQ9UHF4 553 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 SIGLEC7Q9Y286 467 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 ADAM18Q9Y3Q7 739 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 CMAHPQ9Y471 501 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 IER3IP1Q9Y5U9 82 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 AKAP9Q99996 3911 aa10.85□□□□□ -0.67
PTCD1-205ENST00000485746 NDUFS7O75251 213 aa10.84□□□□□ -0.67
PTCD1-205ENST00000485746 PTP4A3O75365 173 aa10.84□□□□□ -0.67
PTCD1-205ENST00000485746 IGHV4-39P01824 125 aa10.84□□□□□ -0.67
PTCD1-205ENST00000485746 SERPINA5P05154 406 aa10.84□□□□□ -0.67
PTCD1-205ENST00000485746 ZNF14P17017 642 aaPredicted RBP10.84□□□□□ -0.67
PTCD1-205ENST00000485746 CENPAP49450 140 aa10.84□□□□□ -0.67
PTCD1-205ENST00000485746 MRPS34P82930 218 aaKnown RBP10.84□□□□□ -0.67
PTCD1-205ENST00000485746 MS4A2Q01362 244 aa10.84□□□□□ -0.67
PTCD1-205ENST00000485746 HGFACQ04756 655 aa10.84□□□□□ -0.67
PTCD1-205ENST00000485746 TBC1D28Q2M2D7 210 aa10.84□□□□□ -0.67
PTCD1-205ENST00000485746 NRN1LQ496H8 165 aa10.84□□□□□ -0.67
PTCD1-205ENST00000485746 GPR139Q6DWJ6 353 aa10.84□□□□□ -0.67
PTCD1-205ENST00000485746 C11orf71Q6IPW1 123 aa10.84□□□□□ -0.67
PTCD1-205ENST00000485746 LCN8Q6JVE9 175 aa10.84□□□□□ -0.67
PTCD1-205ENST00000485746 SMARCD3Q6STE5 483 aa10.84□□□□□ -0.67
PTCD1-205ENST00000485746 DPY19L2P2Q6ZN68 376 aa10.84□□□□□ -0.67
PTCD1-205ENST00000485746 CLDN22Q8N7P3 220 aa10.84□□□□□ -0.67
PTCD1-205ENST00000485746 SLC30A7Q8NEW0 376 aa10.84□□□□□ -0.67
PTCD1-205ENST00000485746 FANK1Q8TC84 345 aa10.84□□□□□ -0.67
PTCD1-205ENST00000485746 RASD2Q96D21 266 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms