RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 DOC2AQ14183 400 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 HERPUD1Q15011 391 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 SF3A2Q15428 464 aaKnown RBP2.59□□□□□ -1.99
SMC4-215ENST00000484799 NRF1Q16656 503 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 VAX1Q5SQQ9 334 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 PIP5KL1Q5T9C9 394 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 PLCXD3Q63HM9 321 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 STUMQ69YW2 141 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 ZNF620Q6ZNG0 422 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 Q6ZSR3 168 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 ZNF740Q8NDX6 193 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 OR10G9Q8NGN4 311 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 OR9G1Q8NH87 305 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 KIR2DL5BQ8NHK3 375 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 MARCH1Q8TCQ1 289 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 ZNF721Q8TF20 911 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 FCRL1Q96LA6 429 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 XPO6Q96QU8 1125 aaKnown RBP2.59□□□□□ -1.99
SMC4-215ENST00000484799 CTRCQ99895 268 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 ECSITQ9BQ95 431 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 OR51M1Q9H341 326 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 RNF167Q9H6Y7 350 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 FGF20Q9NP95 211 aaPredicted RBP2.59□□□□□ -1.99
SMC4-215ENST00000484799 PACSIN2Q9UNF0 486 aaPredicted RBP2.59□□□□□ -1.99
SMC4-215ENST00000484799 GOLT1BQ9Y3E0 138 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 NEUROG3Q9Y4Z2 214 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 SLC25A15Q9Y619 301 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 THSD7BQ9C0I4 1608 aa2.59□□□□□ -1.99
SMC4-215ENST00000484799 MROH5Q6ZUA9 1318 aa2.59□□□□□ -2
SMC4-215ENST00000484799 PLEKHG1Q9ULL1 1385 aa2.59□□□□□ -2
SMC4-215ENST00000484799 TRAV39A0A0B4J263 110 aa2.58□□□□□ -2
SMC4-215ENST00000484799 A0A0J9YXY3 114 aa2.58□□□□□ -2
SMC4-215ENST00000484799 A0A1B0GUA9 196 aa2.58□□□□□ -2
SMC4-215ENST00000484799 RBMY1BA6NDE4 496 aaKnown RBP2.58□□□□□ -2
SMC4-215ENST00000484799 RBMY1EA6NEQ0 496 aaKnown RBP2.58□□□□□ -2
SMC4-215ENST00000484799 PPP1R2P9O14990 202 aa2.58□□□□□ -2
SMC4-215ENST00000484799 TSPAN13O95857 204 aa2.58□□□□□ -2
SMC4-215ENST00000484799 RBMY1DP0C7P1 496 aaKnown RBP2.58□□□□□ -2
SMC4-215ENST00000484799 RBMY1A1P0DJD3 496 aaKnown RBP2.58□□□□□ -2
SMC4-215ENST00000484799 PRKACAP17612 351 aa2.58□□□□□ -2
SMC4-215ENST00000484799 CD1BP29016 333 aa2.58□□□□□ -2
SMC4-215ENST00000484799 RBMXP38159 391 aaKnown RBP2.58□□□□□ -2
SMC4-215ENST00000484799 CDKN1BP46527 198 aa2.58□□□□□ -2
SMC4-215ENST00000484799 CSNK1EP49674 416 aaKnown RBP2.58□□□□□ -2
SMC4-215ENST00000484799 CLDN18P56856 261 aa2.58□□□□□ -2
SMC4-215ENST00000484799 ZNF92Q03936 586 aa2.58□□□□□ -2
SMC4-215ENST00000484799 ECH1Q13011 328 aa2.58□□□□□ -2
SMC4-215ENST00000484799 GPNMBQ14956 572 aa2.58□□□□□ -2
SMC4-215ENST00000484799 MRPL23Q16540 153 aaKnown RBP2.58□□□□□ -2
SMC4-215ENST00000484799 CCDC14Q49A88 953 aa2.58□□□□□ -2
SMC4-215ENST00000484799 PPM1LQ5SGD2 360 aa2.58□□□□□ -2
SMC4-215ENST00000484799 LY6G6FQ5SQ64 297 aa2.58□□□□□ -2
SMC4-215ENST00000484799 TTC19Q6DKK2 380 aaPredicted RBP2.58□□□□□ -2
SMC4-215ENST00000484799 RNF165Q6ZSG1 346 aa2.58□□□□□ -2
SMC4-215ENST00000484799 PUSL1Q8N0Z8 303 aaKnown RBP2.58□□□□□ -2
SMC4-215ENST00000484799 PNKDQ8N490 385 aa2.58□□□□□ -2
SMC4-215ENST00000484799 JAGN1Q8N5M9 183 aa2.58□□□□□ -2
SMC4-215ENST00000484799 TTC29Q8NA56 475 aaPredicted RBP2.58□□□□□ -2
SMC4-215ENST00000484799 DCAF4L2Q8NA75 395 aa2.58□□□□□ -2
SMC4-215ENST00000484799 NEIL3Q8TAT5 605 aa2.58□□□□□ -2
SMC4-215ENST00000484799 GPX8Q8TED1 209 aa2.58□□□□□ -2
SMC4-215ENST00000484799 PIK3IP1Q96FE7 263 aa2.58□□□□□ -2
SMC4-215ENST00000484799 JSRP1Q96MG2 331 aaPredicted RBP2.58□□□□□ -2
SMC4-215ENST00000484799 SLC29A1Q99808 456 aa2.58□□□□□ -2
SMC4-215ENST00000484799 OSBPL10Q9BXB5 764 aa2.58□□□□□ -2
SMC4-215ENST00000484799 ANKRD60Q9BZ19 345 aa2.58□□□□□ -2
SMC4-215ENST00000484799 OR11A1Q9GZK7 315 aa2.58□□□□□ -2
SMC4-215ENST00000484799 BLZF1Q9H2G9 400 aa2.58□□□□□ -2
SMC4-215ENST00000484799 SRMSQ9H3Y6 488 aa2.58□□□□□ -2
SMC4-215ENST00000484799 TDRD3Q9H7E2 651 aaKnown RBP2.58□□□□□ -2
SMC4-215ENST00000484799 NTN4Q9HB63 628 aa2.58□□□□□ -2
SMC4-215ENST00000484799 CCNB1IP1Q9NPC3 277 aa2.58□□□□□ -2
SMC4-215ENST00000484799 HRASLS2Q9NWW9 162 aa2.58□□□□□ -2
SMC4-215ENST00000484799 PDP1Q9P0J1 537 aaPredicted RBP2.58□□□□□ -2
SMC4-215ENST00000484799 XCL2Q9UBD3 114 aa2.58□□□□□ -2
SMC4-215ENST00000484799 LGALS13Q9UHV8 139 aa2.58□□□□□ -2
SMC4-215ENST00000484799 LSM7Q9UK45 103 aaKnown RBP2.58□□□□□ -2
SMC4-215ENST00000484799 ASTN1O14525 1302 aa2.58□□□□□ -2
SMC4-215ENST00000484799 MSH6P52701 1360 aa2.58□□□□□ -2
SMC4-215ENST00000484799 CDC42BPBQ9Y5S2 1711 aa2.57□□□□□ -2
SMC4-215ENST00000484799 PSMB11A5LHX3 300 aa2.57□□□□□ -2
SMC4-215ENST00000484799 USP27XA6NNY8 438 aa2.57□□□□□ -2
SMC4-215ENST00000484799 LYRM9A8MSI8 78 aa2.57□□□□□ -2
SMC4-215ENST00000484799 A8MUA0 341 aa2.57□□□□□ -2
SMC4-215ENST00000484799 ERVV-1B6SEH8 477 aa2.57□□□□□ -2
SMC4-215ENST00000484799 H3BNH8 94 aa2.57□□□□□ -2
SMC4-215ENST00000484799 CHMP2AO43633 222 aa2.57□□□□□ -2
SMC4-215ENST00000484799 FAM189A1O60320 539 aa2.57□□□□□ -2
SMC4-215ENST00000484799 CLPXO76031 633 aa2.57□□□□□ -2
SMC4-215ENST00000484799 CLIC3O95833 236 aa2.57□□□□□ -2
SMC4-215ENST00000484799 OTCP00480 354 aa2.57□□□□□ -2
SMC4-215ENST00000484799 BCKDHBP21953 392 aa2.57□□□□□ -2
SMC4-215ENST00000484799 TNFSF9P41273 254 aa2.57□□□□□ -2
SMC4-215ENST00000484799 CAV2P51636 162 aa2.57□□□□□ -2
SMC4-215ENST00000484799 LINC00315P59091 139 aa2.57□□□□□ -2
SMC4-215ENST00000484799 ACVR1Q04771 509 aa2.57□□□□□ -2
SMC4-215ENST00000484799 SELENBP1Q13228 472 aa2.57□□□□□ -2
SMC4-215ENST00000484799 CLINT1Q14677 625 aa2.57□□□□□ -2
SMC4-215ENST00000484799 NCF4Q15080 339 aa2.57□□□□□ -2
SMC4-215ENST00000484799 KCTD19Q17RG1 926 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms