RNA–Protein interactions for RNA: ENST00000484704.5

HLA-F-226, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,201 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-226ENST00000484704 IGHV2OR16-5A0A0B4J2B6 119 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 ZNF503-AS2A6NEH8 195 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 B2RBV5 119 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 B9A039 149 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 ARPC2O15144 300 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 STAMBPO95630 424 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 ERCC1P07992 297 aaPredicted RBP13.03□□□□□ -0.32
HLA-F-226ENST00000484704 PATE4P0C8F1 98 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 NPR2P20594 1047 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 LSM11P83369 360 aaKnown RBP eCLIP13.03□□□□□ -0.32
HLA-F-226ENST00000484704 SPIBQ01892 262 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 PLP2Q04941 152 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 SNTB2Q13425 540 aaKnown RBP13.03□□□□□ -0.32
HLA-F-226ENST00000484704 TNK1Q13470 666 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 RAB39AQ14964 217 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 SGCAQ16586 387 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 SPATS1Q496A3 300 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 FAM205BPQ63HN1 556 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 C11orf71Q6IPW1 123 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 PODNL1Q6PEZ8 512 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 LRFN4Q6PJG9 635 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 DPPA2Q7Z7J5 298 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 SKA3Q8IX90 412 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 NUP37Q8NFH4 326 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 OR52J3Q8NH60 311 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 SPATA3Q8NHX4 192 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 FNDC8Q8TC99 324 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 HTRA1Q92743 480 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 MS4A3Q96HJ5 214 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 FAM46AQ96IP4 442 aaKnown RBP13.03□□□□□ -0.32
HLA-F-226ENST00000484704 CDH20Q9HBT6 801 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 DYNLRB1Q9NP97 96 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 B3GNT2Q9NY97 397 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 NDUFAF4Q9P032 175 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 GRHPRQ9UBQ7 328 aa13.03□□□□□ -0.32
HLA-F-226ENST00000484704 ZNF346Q9UL40 294 aaKnown RBP13.03□□□□□ -0.32
HLA-F-226ENST00000484704 IQCMA0A1B0GVH7 501 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 A0A1W2PRQ8 180 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 A6NIZ1 184 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 NPIPB13A6NJU9 1138 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 NPIPB4C9JG80 1138 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 RNF223E7ERA6 249 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 H7C417 338 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 XKRYO14609 159 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 PDE5AO76074 875 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 GADD45GO95257 159 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 SLC2A10O95528 541 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 PTHP01270 115 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 FABP3P05413 133 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 THBS4P35443 961 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 DSCR9P59020 149 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 RAP1BP61224 184 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 RAP1AP62834 184 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 PPP2R2BQ00005 443 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 HSF2Q03933 536 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 RUNX1T1Q06455 604 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 DGCR6Q14129 220 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 ZBED5Q49AG3 693 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 ARMC4Q5T2S8 1044 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 MYPOPQ86VE0 399 aaPredicted RBP13.02□□□□□ -0.33
HLA-F-226ENST00000484704 LRRC18Q8N456 261 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 FITM2Q8N6M3 262 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 HDAC2Q92769 488 aaKnown RBP13.02□□□□□ -0.33
HLA-F-226ENST00000484704 ALG12Q9BV10 488 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 MRPL13Q9BYD1 178 aaKnown RBP13.02□□□□□ -0.33
HLA-F-226ENST00000484704 LRMDAQ9H2I8 198 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 PLK3Q9H4B4 646 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 NOX3Q9HBY0 568 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 FBXO9Q9UK97 447 aaPredicted RBP13.02□□□□□ -0.33
HLA-F-226ENST00000484704 CMAHPQ9Y471 501 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 TLN2Q9Y4G6 2542 aa13.02□□□□□ -0.33
HLA-F-226ENST00000484704 HIVEP2P31629 2446 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 A0A1W2PPL8 197 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 SH3PXD2BA1X283 911 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 MGRN1O60291 552 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 PRSS23O95084 383 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 SERPINA5P05154 406 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 ZNF14P17017 642 aaPredicted RBP13.01□□□□□ -0.33
HLA-F-226ENST00000484704 FUT4P22083 530 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 CALB2P22676 271 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 RPS23P62266 143 aaKnown RBP13.01□□□□□ -0.33
HLA-F-226ENST00000484704 ERVK-25P63136 954 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 VLDLRP98155 873 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 HGFACQ04756 655 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 FMODQ06828 376 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 ADIPOQQ15848 244 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 CARTPTQ16568 116 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 HIST3H3Q16695 136 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 NRN1LQ496H8 165 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 THEM4Q5T1C6 240 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 TMPRSS11FQ6ZWK6 438 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 FAM86B1Q8N7N1 296 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 OR1J2Q8NGS2 313 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 SLC7A13Q8TCU3 470 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 REG4Q9BYZ8 158 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 C1orf198Q9H425 327 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 ZNF442Q9H7R0 627 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 SMURF2Q9HAU4 748 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 CD300AQ9UGN4 299 aa13.01□□□□□ -0.33
HLA-F-226ENST00000484704 TMCC3Q9ULS5 477 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms