RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 CXXC4Q9H2H0 198 aa13.84□□□□□ -0.19
UPF3A-208ENST00000484246 OR52D1Q9H346 318 aa13.84□□□□□ -0.19
UPF3A-208ENST00000484246 UBTD1Q9HAC8 227 aa13.84□□□□□ -0.19
UPF3A-208ENST00000484246 BEX4Q9NWD9 120 aaPredicted RBP13.84□□□□□ -0.19
UPF3A-208ENST00000484246 GRHPRQ9UBQ7 328 aa13.84□□□□□ -0.19
UPF3A-208ENST00000484246 FBXL3Q9UKT7 428 aa13.84□□□□□ -0.19
UPF3A-208ENST00000484246 PLEKHA6Q9Y2H5 1048 aa13.84□□□□□ -0.19
UPF3A-208ENST00000484246 CDH10Q9Y6N8 788 aa13.84□□□□□ -0.19
UPF3A-208ENST00000484246 POLQO75417 2590 aa13.84□□□□□ -0.19
UPF3A-208ENST00000484246 CSMD1Q96PZ7 3565 aa13.84□□□□□ -0.19
UPF3A-208ENST00000484246 CSMD2Q7Z408 3487 aa13.84□□□□□ -0.19
UPF3A-208ENST00000484246 HRNRQ86YZ3 2850 aaPredicted RBP13.83□□□□□ -0.2
UPF3A-208ENST00000484246 IGKV1D-43A0A0B4J1Z2 117 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 PRSS37A4D1T9 235 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 EBAG9O00559 213 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 UBL3O95164 117 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 FARS2O95363 451 aaKnown RBP13.83□□□□□ -0.2
UPF3A-208ENST00000484246 CST1P01037 141 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 CECR9P0C854 216 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 NPR2P20594 1047 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 RPS6KA3P51812 740 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 IST1P53990 364 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 CD47Q08722 323 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 KEAP1Q14145 624 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 CD300LDQ6UXZ3 194 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 RASSF6Q6ZTQ3 369 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 MDP1Q86V88 176 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 AQP11Q8NBQ7 271 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 PIGTQ969N2 578 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 FBXW5Q969U6 566 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 NABP1Q96AH0 204 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 SLCO4A1Q96BD0 722 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 RBP7Q96R05 134 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 GRIP2Q9C0E4 1043 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 IL20Q9NYY1 176 aa13.83□□□□□ -0.2
UPF3A-208ENST00000484246 VSX1Q9NZR4 365 aaPredicted RBP13.83□□□□□ -0.2
UPF3A-208ENST00000484246 ANKRD17O75179 2603 aaKnown RBP13.83□□□□□ -0.2
UPF3A-208ENST00000484246 TEX13CA0A0J9YWL9 993 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 SLC22A23A1A5C7 686 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 XKRYO14609 159 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 IDH3BO43837 385 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 SLC2A10O95528 541 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 HLA-HP01893 362 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 DANCRP0C864 163 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 PAX1P15863 534 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 GSTM3P21266 225 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 CDH11P55287 796 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 TUBA1BP68363 451 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 TUBA4AP68366 448 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 CBX1P83916 185 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 NAAAQ02083 359 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 FMODQ06828 376 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 SPOCK1Q08629 439 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 GSG1Q2KHT4 349 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 DEFB113Q30KQ7 82 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 TUBA1AQ71U36 451 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 DTX2Q86UW9 622 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 SKA3Q8IX90 412 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 IL17RDQ8NFM7 739 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 OR10G2Q8NGC3 310 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 ZDHHC16Q969W1 377 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 UTP4Q969X6 686 aaKnown RBP13.82□□□□□ -0.2
UPF3A-208ENST00000484246 SIAEQ9HAT2 523 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 NOX3Q9HBY0 568 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 DNAJB9Q9UBS3 223 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 U3KQV3 271 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 LRBAP50851 2863 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 SPG11Q96JI7 2443 aa13.82□□□□□ -0.2
UPF3A-208ENST00000484246 RAI1Q7Z5J4 1906 aaPredicted RBP13.82□□□□□ -0.2
UPF3A-208ENST00000484246 ARHGEF9O43307 516 aa13.81□□□□□ -0.2
UPF3A-208ENST00000484246 GASTP01350 101 aa13.81□□□□□ -0.2
UPF3A-208ENST00000484246 ZNF14P17017 642 aaPredicted RBP13.81□□□□□ -0.2
UPF3A-208ENST00000484246 MYBPC1Q00872 1141 aa13.81□□□□□ -0.2
UPF3A-208ENST00000484246 COX10Q12887 443 aa13.81□□□□□ -0.2
UPF3A-208ENST00000484246 C1orf146Q5VVC0 180 aa13.81□□□□□ -0.2
UPF3A-208ENST00000484246 ZNF544Q6NX49 715 aa13.81□□□□□ -0.2
UPF3A-208ENST00000484246 B3GLCTQ6Y288 498 aa13.81□□□□□ -0.2
UPF3A-208ENST00000484246 DEPDC4Q8N2C3 294 aa13.81□□□□□ -0.2
UPF3A-208ENST00000484246 RASD2Q96D21 266 aa13.81□□□□□ -0.2
UPF3A-208ENST00000484246 C1QTNF6Q9BXI9 259 aa13.81□□□□□ -0.2
UPF3A-208ENST00000484246 ARMC1Q9NVT9 282 aa13.81□□□□□ -0.2
UPF3A-208ENST00000484246 IER3IP1Q9Y5U9 82 aa13.81□□□□□ -0.2
UPF3A-208ENST00000484246 TACC2O95359 2948 aa13.8□□□□□ -0.2
UPF3A-208ENST00000484246 E7EQL1 145 aa13.8□□□□□ -0.2
UPF3A-208ENST00000484246 DEAF1O75398 565 aaPredicted RBP13.8□□□□□ -0.2
UPF3A-208ENST00000484246 PPP1R3DO95685 299 aa13.8□□□□□ -0.2
UPF3A-208ENST00000484246 CRYAAP02489 173 aa13.8□□□□□ -0.2
UPF3A-208ENST00000484246 MMP7P09237 267 aaPredicted RBP13.8□□□□□ -0.2
UPF3A-208ENST00000484246 IDH3GP51553 393 aaPredicted RBP13.8□□□□□ -0.2
UPF3A-208ENST00000484246 CCNIQ14094 377 aa13.8□□□□□ -0.2
UPF3A-208ENST00000484246 PGGHGQ32M88 737 aa13.8□□□□□ -0.2
UPF3A-208ENST00000484246 SLC36A2Q495M3 483 aa13.8□□□□□ -0.2
UPF3A-208ENST00000484246 FAM27BQ5VT28 67 aa13.8□□□□□ -0.2
UPF3A-208ENST00000484246 SLC22A25Q6T423 547 aa13.8□□□□□ -0.2
UPF3A-208ENST00000484246 PTCHD4Q6ZW05 846 aa13.8□□□□□ -0.2
UPF3A-208ENST00000484246 MYPOPQ86VE0 399 aaPredicted RBP13.8□□□□□ -0.2
UPF3A-208ENST00000484246 LRRC75A-AS1Q8N1F1 130 aa13.8□□□□□ -0.2
UPF3A-208ENST00000484246 NUP37Q8NFH4 326 aa13.8□□□□□ -0.2
UPF3A-208ENST00000484246 OR52L1Q8NGH7 329 aa13.8□□□□□ -0.2
UPF3A-208ENST00000484246 GIPC3Q8TF64 312 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms