RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 NMD3Q96D46 503 aaKnown RBP15.4■□□□□ 0.06
ATG4B-221ENST00000483778 SEPHS2Q99611 448 aa15.4■□□□□ 0.06
ATG4B-221ENST00000483778 TMEM120AQ9BXJ8 343 aa15.4■□□□□ 0.06
ATG4B-221ENST00000483778 SLC19A3Q9BZV2 496 aa15.4■□□□□ 0.06
ATG4B-221ENST00000483778 UGT2A1Q9Y4X1 527 aa15.4■□□□□ 0.06
ATG4B-221ENST00000483778 DYSFO75923 2080 aa15.39■□□□□ 0.05
ATG4B-221ENST00000483778 A0A1W2PPW3 197 aa15.39■□□□□ 0.05
ATG4B-221ENST00000483778 PIP5K1CO60331 668 aa15.39■□□□□ 0.05
ATG4B-221ENST00000483778 CDC14BO60729 498 aa15.39■□□□□ 0.05
ATG4B-221ENST00000483778 SASH3O75995 380 aa15.39■□□□□ 0.05
ATG4B-221ENST00000483778 IGHG1P01857 330 aa15.39■□□□□ 0.05
ATG4B-221ENST00000483778 TSPAN19P0C672 248 aa15.39■□□□□ 0.05
ATG4B-221ENST00000483778 ZNF250P15622 560 aa15.39■□□□□ 0.05
ATG4B-221ENST00000483778 DVL1P1P54792 670 aaPredicted RBP15.39■□□□□ 0.05
ATG4B-221ENST00000483778 UCP2P55851 309 aa15.39■□□□□ 0.05
ATG4B-221ENST00000483778 CCL8P80075 99 aa15.39■□□□□ 0.05
ATG4B-221ENST00000483778 FMODQ06828 376 aa15.39■□□□□ 0.05
ATG4B-221ENST00000483778 HNRNPA0Q13151 305 aaKnown RBP15.39■□□□□ 0.05
ATG4B-221ENST00000483778 CYLC2Q14093 348 aaPredicted RBP15.39■□□□□ 0.05
ATG4B-221ENST00000483778 ARMC4Q5T2S8 1044 aa15.39■□□□□ 0.05
ATG4B-221ENST00000483778 INTS11Q5TA45 600 aaKnown RBP15.39■□□□□ 0.05
ATG4B-221ENST00000483778 METTL21CQ5VZV1 264 aa15.39■□□□□ 0.05
ATG4B-221ENST00000483778 RGS7BPQ6MZT1 257 aaPredicted RBP15.39■□□□□ 0.05
ATG4B-221ENST00000483778 CGB2Q6NT52 195 aa15.39■□□□□ 0.05
ATG4B-221ENST00000483778 DEF8Q6ZN54 512 aa15.39■□□□□ 0.05
ATG4B-221ENST00000483778 SLC16A14Q7RTX9 510 aa15.39■□□□□ 0.05
ATG4B-221ENST00000483778 CLDN22Q8N7P3 220 aa15.39■□□□□ 0.05
ATG4B-221ENST00000483778 C10orf82Q8WW14 230 aa15.39■□□□□ 0.05
ATG4B-221ENST00000483778 HDAC2Q92769 488 aaKnown RBP15.39■□□□□ 0.05
ATG4B-221ENST00000483778 SGTBQ96EQ0 304 aa15.39■□□□□ 0.05
ATG4B-221ENST00000483778 IGLV3-9A0A075B6K5 115 aa15.38■□□□□ 0.05
ATG4B-221ENST00000483778 PPIHO43447 177 aaKnown RBP15.38■□□□□ 0.05
ATG4B-221ENST00000483778 ITGA2P17301 1181 aa15.38■□□□□ 0.05
ATG4B-221ENST00000483778 ACHEP22303 614 aa15.38■□□□□ 0.05
ATG4B-221ENST00000483778 SRP14P37108 136 aaKnown RBP15.38■□□□□ 0.05
ATG4B-221ENST00000483778 RBMXP38159 391 aaKnown RBP15.38■□□□□ 0.05
ATG4B-221ENST00000483778 ZNF133P52736 654 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-221ENST00000483778 TAS2R41P59536 307 aa15.38■□□□□ 0.05
ATG4B-221ENST00000483778 RPS23P62266 143 aaKnown RBP15.38■□□□□ 0.05
ATG4B-221ENST00000483778 KLF10Q13118 480 aa15.38■□□□□ 0.05
ATG4B-221ENST00000483778 TMEM53Q6P2H8 277 aa15.38■□□□□ 0.05
ATG4B-221ENST00000483778 HDXQ7Z353 690 aa15.38■□□□□ 0.05
ATG4B-221ENST00000483778 NOXO1Q8NFA2 376 aa15.38■□□□□ 0.05
ATG4B-221ENST00000483778 SYNPRQ8TBG9 265 aa15.38■□□□□ 0.05
ATG4B-221ENST00000483778 TMEM239Q8WW34 195 aa15.38■□□□□ 0.05
ATG4B-221ENST00000483778 NABP1Q96AH0 204 aa15.38■□□□□ 0.05
ATG4B-221ENST00000483778 ECSITQ9BQ95 431 aa15.38■□□□□ 0.05
ATG4B-221ENST00000483778 CDH20Q9HBT6 801 aa15.38■□□□□ 0.05
ATG4B-221ENST00000483778 HINT3Q9NQE9 182 aaKnown RBP15.38■□□□□ 0.05
ATG4B-221ENST00000483778 INIPQ9NRY2 104 aa15.38■□□□□ 0.05
ATG4B-221ENST00000483778 FBXL3Q9UKT7 428 aa15.38■□□□□ 0.05
ATG4B-221ENST00000483778 CACNG2Q9Y698 323 aa15.38■□□□□ 0.05
ATG4B-221ENST00000483778 LOC100509620A0A075B734 347 aa15.37■□□□□ 0.05
ATG4B-221ENST00000483778 A0A1W2PRG6 482 aa15.37■□□□□ 0.05
ATG4B-221ENST00000483778 C17orf100A8MU93 164 aa15.37■□□□□ 0.05
ATG4B-221ENST00000483778 B4DSR2 109 aa15.37■□□□□ 0.05
ATG4B-221ENST00000483778 MGRN1O60291 552 aa15.37■□□□□ 0.05
ATG4B-221ENST00000483778 FARS2O95363 451 aaKnown RBP15.37■□□□□ 0.05
ATG4B-221ENST00000483778 LCKP06239 509 aa15.37■□□□□ 0.05
ATG4B-221ENST00000483778 SAGP10523 405 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-221ENST00000483778 TMEM33P57088 247 aa15.37■□□□□ 0.05
ATG4B-221ENST00000483778 GLO1Q04760 184 aa15.37■□□□□ 0.05
ATG4B-221ENST00000483778 NKPD1Q17RQ9 610 aa15.37■□□□□ 0.05
ATG4B-221ENST00000483778 PABPC1L2AQ5JQF8 200 aa15.37■□□□□ 0.05
ATG4B-221ENST00000483778 AVPI1Q5T686 147 aa15.37■□□□□ 0.05
ATG4B-221ENST00000483778 REP15Q6BDI9 236 aa15.37■□□□□ 0.05
ATG4B-221ENST00000483778 C1orf229Q6ZS94 237 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-221ENST00000483778 ICA1LQ8NDH6 482 aa15.37■□□□□ 0.05
ATG4B-221ENST00000483778 RBM15BQ8NDT2 890 aaKnown RBP15.37■□□□□ 0.05
ATG4B-221ENST00000483778 NSMAFQ92636 917 aa15.37■□□□□ 0.05
ATG4B-221ENST00000483778 SAR1AQ9NR31 198 aa15.37■□□□□ 0.05
ATG4B-221ENST00000483778 HIF1ANQ9NWT6 349 aa15.37■□□□□ 0.05
ATG4B-221ENST00000483778 SNX13Q9Y5W8 968 aa15.37■□□□□ 0.05
ATG4B-221ENST00000483778 LOC100653049A0A140TA62 436 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 MCIDASD6RGH6 385 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 MRASO14807 208 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 KRT34O76011 436 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 OR5F1O95221 314 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 VENTXO95231 258 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 AVPP01185 164 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 GAAP10253 952 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 LSP1P33241 339 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 WNT5AP41221 380 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 RBM34P42696 430 aaKnown RBP15.36■□□□□ 0.05
ATG4B-221ENST00000483778 ZNF84P51523 738 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 KLF3P57682 345 aaPredicted RBP15.36■□□□□ 0.05
ATG4B-221ENST00000483778 SGCAQ16586 387 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 SLC36A2Q495M3 483 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 CYBRD1Q53TN4 286 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 SPRNQ5BIV9 151 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 C10orf128Q5T292 105 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 SLC25A47Q6Q0C1 308 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 ZNF101Q8IZC7 436 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 OR8J3Q8NGG0 315 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 AKR7LQ8NHP1 331 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 ZNF519Q8TB69 540 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 LIPHQ8WWY8 451 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 C11orf40Q8WZ69 217 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 A4GNTQ9UNA3 340 aa15.36■□□□□ 0.05
ATG4B-221ENST00000483778 TANC2Q9HCD6 1990 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms