RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 FBXL3Q9UKT7 428 aa15.93■□□□□ 0.14
CLK1-211ENST00000481641 FARS2O95363 451 aaKnown RBP15.92■□□□□ 0.14
CLK1-211ENST00000481641 SLC2A10O95528 541 aa15.92■□□□□ 0.14
CLK1-211ENST00000481641 CDAP32320 146 aa15.92■□□□□ 0.14
CLK1-211ENST00000481641 LSP1P33241 339 aa15.92■□□□□ 0.14
CLK1-211ENST00000481641 RBM34P42696 430 aaKnown RBP15.92■□□□□ 0.14
CLK1-211ENST00000481641 RPS23P62266 143 aaKnown RBP15.92■□□□□ 0.14
CLK1-211ENST00000481641 KRTAP24-1Q3LI83 254 aa15.92■□□□□ 0.14
CLK1-211ENST00000481641 COQ5Q5HYK3 327 aa15.92■□□□□ 0.14
CLK1-211ENST00000481641 TMEM53Q6P2H8 277 aa15.92■□□□□ 0.14
CLK1-211ENST00000481641 ERICH5Q6P6B1 374 aa15.92■□□□□ 0.14
CLK1-211ENST00000481641 SLC16A14Q7RTX9 510 aa15.92■□□□□ 0.14
CLK1-211ENST00000481641 TPD52L3Q96J77 140 aa15.92■□□□□ 0.14
CLK1-211ENST00000481641 TSPAN32Q96QS1 320 aa15.92■□□□□ 0.14
CLK1-211ENST00000481641 MS4A5Q9H3V2 200 aa15.92■□□□□ 0.14
CLK1-211ENST00000481641 NARFLQ9H6Q4 476 aa15.92■□□□□ 0.14
CLK1-211ENST00000481641 IGKV1D-43A0A0B4J1Z2 117 aa15.91■□□□□ 0.14
CLK1-211ENST00000481641 A0A1W2PPW3 197 aa15.91■□□□□ 0.14
CLK1-211ENST00000481641 BBIP1A8MTZ0 92 aa15.91■□□□□ 0.14
CLK1-211ENST00000481641 NCR1O76036 304 aa15.91■□□□□ 0.14
CLK1-211ENST00000481641 NPPAP01160 153 aa15.91■□□□□ 0.14
CLK1-211ENST00000481641 VIMP08670 466 aaKnown RBP15.91■□□□□ 0.14
CLK1-211ENST00000481641 ACADSP16219 412 aa15.91■□□□□ 0.14
CLK1-211ENST00000481641 KDELR2P33947 212 aa15.91■□□□□ 0.14
CLK1-211ENST00000481641 FMODQ06828 376 aa15.91■□□□□ 0.14
CLK1-211ENST00000481641 RGS7BPQ6MZT1 257 aaPredicted RBP15.91■□□□□ 0.14
CLK1-211ENST00000481641 MEX3DQ86XN8 651 aaKnown RBP15.91■□□□□ 0.14
CLK1-211ENST00000481641 POU5F2Q8N7G0 328 aa15.91■□□□□ 0.14
CLK1-211ENST00000481641 HDAC2Q92769 488 aaKnown RBP15.91■□□□□ 0.14
CLK1-211ENST00000481641 YIPF5Q969M3 257 aa15.91■□□□□ 0.14
CLK1-211ENST00000481641 SEPHS2Q99611 448 aa15.91■□□□□ 0.14
CLK1-211ENST00000481641 CDH20Q9HBT6 801 aa15.91■□□□□ 0.14
CLK1-211ENST00000481641 ARMCX1Q9P291 453 aa15.91■□□□□ 0.14
CLK1-211ENST00000481641 MED31Q9Y3C7 131 aa15.91■□□□□ 0.14
CLK1-211ENST00000481641 FAM220BPB1ANY3 271 aa15.9■□□□□ 0.14
CLK1-211ENST00000481641 IFNA14P01570 189 aa15.9■□□□□ 0.14
CLK1-211ENST00000481641 YAP1P46937 504 aaKnown RBP15.9■□□□□ 0.14
CLK1-211ENST00000481641 ZNF84P51523 738 aa15.9■□□□□ 0.14
CLK1-211ENST00000481641 MAPRE2Q15555 327 aa15.9■□□□□ 0.14
CLK1-211ENST00000481641 SLC36A2Q495M3 483 aa15.9■□□□□ 0.14
CLK1-211ENST00000481641 ARMC4Q5T2S8 1044 aa15.9■□□□□ 0.14
CLK1-211ENST00000481641 MICU2Q8IYU8 434 aa15.9■□□□□ 0.14
CLK1-211ENST00000481641 LINC01356Q8N9X3 169 aa15.9■□□□□ 0.14
CLK1-211ENST00000481641 ICA1LQ8NDH6 482 aa15.9■□□□□ 0.14
CLK1-211ENST00000481641 RBM15BQ8NDT2 890 aaKnown RBP15.9■□□□□ 0.14
CLK1-211ENST00000481641 OR2T12Q8NG77 320 aa15.9■□□□□ 0.14
CLK1-211ENST00000481641 NSMAFQ92636 917 aa15.9■□□□□ 0.14
CLK1-211ENST00000481641 HPS1Q92902 700 aa15.9■□□□□ 0.14
CLK1-211ENST00000481641 RCN3Q96D15 328 aa15.9■□□□□ 0.14
CLK1-211ENST00000481641 GID8Q9NWU2 228 aa15.9■□□□□ 0.14
CLK1-211ENST00000481641 CMTM6Q9NX76 183 aa15.9■□□□□ 0.14
CLK1-211ENST00000481641 TAAR3PQ9P1P4 343 aa15.9■□□□□ 0.14
CLK1-211ENST00000481641 RHCGQ9UBD6 479 aa15.9■□□□□ 0.14
CLK1-211ENST00000481641 WNT9BO14905 357 aa15.89■□□□□ 0.13
CLK1-211ENST00000481641 ENTPD5O75356 428 aa15.89■□□□□ 0.13
CLK1-211ENST00000481641 LCKP06239 509 aa15.89■□□□□ 0.13
CLK1-211ENST00000481641 MMP7P09237 267 aaPredicted RBP15.89■□□□□ 0.13
CLK1-211ENST00000481641 TSPAN19P0C672 248 aa15.89■□□□□ 0.13
CLK1-211ENST00000481641 HNF1AP20823 631 aa15.89■□□□□ 0.13
CLK1-211ENST00000481641 MAGEB1P43366 347 aa15.89■□□□□ 0.13
CLK1-211ENST00000481641 DAP3P51398 398 aaKnown RBP15.89■□□□□ 0.13
CLK1-211ENST00000481641 CDH15P55291 814 aa15.89■□□□□ 0.13
CLK1-211ENST00000481641 GUCY1A3Q02108 690 aa15.89■□□□□ 0.13
CLK1-211ENST00000481641 TOP3AQ13472 1001 aaPredicted RBP15.89■□□□□ 0.13
CLK1-211ENST00000481641 NKPD1Q17RQ9 610 aa15.89■□□□□ 0.13
CLK1-211ENST00000481641 CLDN22Q8N7P3 220 aa15.89■□□□□ 0.13
CLK1-211ENST00000481641 PCYOX1LQ8NBM8 494 aa15.89■□□□□ 0.13
CLK1-211ENST00000481641 CPEB3Q8NE35 698 aaKnown RBP15.89■□□□□ 0.13
CLK1-211ENST00000481641 LIPHQ8WWY8 451 aa15.89■□□□□ 0.13
CLK1-211ENST00000481641 RDH5Q92781 318 aa15.89■□□□□ 0.13
CLK1-211ENST00000481641 POLR2J2Q9GZM3 115 aaKnown RBP15.89■□□□□ 0.13
CLK1-211ENST00000481641 POLR2J3Q9H1A7 115 aaKnown RBP15.89■□□□□ 0.13
CLK1-211ENST00000481641 ZNF275Q9NSD4 429 aaPredicted RBP15.89■□□□□ 0.13
CLK1-211ENST00000481641 A4GNTQ9UNA3 340 aa15.89■□□□□ 0.13
CLK1-211ENST00000481641 UGT2A1Q9Y4X1 527 aa15.89■□□□□ 0.13
CLK1-211ENST00000481641 SNX13Q9Y5W8 968 aa15.89■□□□□ 0.13
CLK1-211ENST00000481641 CAPN7Q9Y6W3 813 aa15.89■□□□□ 0.13
CLK1-211ENST00000481641 IQCMA0A1B0GVH7 501 aa15.88■□□□□ 0.13
CLK1-211ENST00000481641 ELOVL7A1L3X0 281 aa15.88■□□□□ 0.13
CLK1-211ENST00000481641 J3KTA2 159 aa15.88■□□□□ 0.13
CLK1-211ENST00000481641 IGF2P01344 180 aa15.88■□□□□ 0.13
CLK1-211ENST00000481641 IFI30P13284 250 aa15.88■□□□□ 0.13
CLK1-211ENST00000481641 MAKP20794 623 aa15.88■□□□□ 0.13
CLK1-211ENST00000481641 GPR6P46095 362 aaPredicted RBP15.88■□□□□ 0.13
CLK1-211ENST00000481641 ZNF133P52736 654 aaPredicted RBP15.88■□□□□ 0.13
CLK1-211ENST00000481641 SELENOWP63302 87 aa15.88■□□□□ 0.13
CLK1-211ENST00000481641 SGCAQ16586 387 aa15.88■□□□□ 0.13
CLK1-211ENST00000481641 TBC1D28Q2M2D7 210 aa15.88■□□□□ 0.13
CLK1-211ENST00000481641 PABPC1L2AQ5JQF8 200 aa15.88■□□□□ 0.13
CLK1-211ENST00000481641 C10orf128Q5T292 105 aa15.88■□□□□ 0.13
CLK1-211ENST00000481641 VTCN1Q7Z7D3 282 aa15.88■□□□□ 0.13
CLK1-211ENST00000481641 DPPA2Q7Z7J5 298 aa15.88■□□□□ 0.13
CLK1-211ENST00000481641 IGFN1Q86VF2 1251 aa15.88■□□□□ 0.13
CLK1-211ENST00000481641 CLDND2Q8NHS1 167 aa15.88■□□□□ 0.13
CLK1-211ENST00000481641 SYNPRQ8TBG9 265 aa15.88■□□□□ 0.13
CLK1-211ENST00000481641 GTF3AQ92664 365 aaKnown RBP15.88■□□□□ 0.13
CLK1-211ENST00000481641 NABP1Q96AH0 204 aa15.88■□□□□ 0.13
CLK1-211ENST00000481641 NMD3Q96D46 503 aaKnown RBP15.88■□□□□ 0.13
CLK1-211ENST00000481641 TXNIPQ9H3M7 391 aa15.88■□□□□ 0.13
CLK1-211ENST00000481641 ZNF446Q9NWS9 450 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms