RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 IKZF1Q13422 519 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 GAB1Q13480 694 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 COL9A2Q14055 689 aaPredicted RBP8.68□□□□□ -1.02
GARNL3-216ENST00000481242 KCNAB1Q14722 419 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 COX20Q5RI15 118 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 VHLLQ6RSH7 139 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 Q6ZS52 159 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 DOK3Q7L591 496 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 DPPA2Q7Z7J5 298 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 SVBPQ8N300 66 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 CLDN22Q8N7P3 220 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 OR51A2Q8NGJ7 313 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 C3orf49Q96BT1 292 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 TSSK2Q96PF2 358 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 OR5B12Q96R08 314 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 C12orf57Q99622 126 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 NRSN2Q9GZP1 204 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 TUBB1Q9H4B7 451 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 DOCK1Q14185 1865 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 PRKRAO75569 313 aaKnown RBP8.68□□□□□ -1.02
GARNL3-216ENST00000481242 RAF1P04049 648 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 HOXB1P14653 301 aaPredicted RBP8.68□□□□□ -1.02
GARNL3-216ENST00000481242 CTGFP29279 349 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 BSGP35613 385 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 CAMLGP49069 296 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 HSF1Q00613 529 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 TEKQ02763 1124 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 BAK1Q16611 211 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 MEP1BQ16820 701 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 LEXMQ3ZCV2 418 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 UBE2NLQ5JXB2 153 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 COX15Q7KZN9 410 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 OR4M1Q8NGD0 313 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 C16orf52Q8NHV5 167 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 STK35Q8TDR2 534 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 ZNF775Q96BV0 537 aaPredicted RBP8.68□□□□□ -1.02
GARNL3-216ENST00000481242 RAB3CQ96E17 227 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 ZNF582Q96NG8 517 aaPredicted RBP8.68□□□□□ -1.02
GARNL3-216ENST00000481242 KCNJ15Q99712 375 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 DPCDQ9BVM2 203 aaPredicted RBP8.68□□□□□ -1.02
GARNL3-216ENST00000481242 RTL8AQ9BWD3 113 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 OR51E2Q9H255 320 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 CHST8Q9H2A9 424 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 MRPS28Q9Y2Q9 187 aaKnown RBP8.68□□□□□ -1.02
GARNL3-216ENST00000481242 IGLV3-16A0A075B6K0 115 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 SPINT2O43291 252 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 DOK2O60496 412 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 IGFBP6P24592 240 aaPredicted RBP8.68□□□□□ -1.02
GARNL3-216ENST00000481242 SNCAP37840 140 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 IL13RA1P78552 427 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 ASTLQ6HA08 431 aaPredicted RBP8.68□□□□□ -1.02
GARNL3-216ENST00000481242 JMJD6Q6NYC1 403 aaPredicted RBP8.68□□□□□ -1.02
GARNL3-216ENST00000481242 RYDENQ9NUL5 291 aaKnown RBP8.68□□□□□ -1.02
GARNL3-216ENST00000481242 HRH3Q9Y5N1 445 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 SNX11Q9Y5W9 270 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 B3GALT1Q9Y5Z6 326 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 THSD7AQ9UPZ6 1657 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 IGHV3-20A0A0C4DH32 117 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 A0A1W2PPC1 479 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 MEIOCA2RUB1 952 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 E9PI62 339 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 F5H5P2 479 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 M0R082 166 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 B4GALT3O60512 393 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 POU3F3P20264 500 aaPredicted RBP8.68□□□□□ -1.02
GARNL3-216ENST00000481242 DAPP51397 102 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 CFAP77Q6ZQR2 320 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 MEX3DQ86XN8 651 aaKnown RBP8.68□□□□□ -1.02
GARNL3-216ENST00000481242 ARIH2OSQ8N7S6 290 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 CCL4L1Q8NHW4 92 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 TMEM255BQ8WV15 326 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 OIT3Q8WWZ8 545 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 GHSRQ92847 366 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 RBPMSQ93062 196 aaKnown RBP8.68□□□□□ -1.02
GARNL3-216ENST00000481242 OXGR1Q96P68 337 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 SULT4A1Q9BR01 284 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 SEMA4GQ9NTN9 838 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 OR52A1Q9UKL2 312 aa8.68□□□□□ -1.02
GARNL3-216ENST00000481242 SCG5P05408 212 aa8.67□□□□□ -1.02
GARNL3-216ENST00000481242 MAKP20794 623 aa8.67□□□□□ -1.02
GARNL3-216ENST00000481242 EPHA8P29322 1005 aaPredicted RBP8.67□□□□□ -1.02
GARNL3-216ENST00000481242 C21orf33P30042 268 aaPredicted RBP8.67□□□□□ -1.02
GARNL3-216ENST00000481242 GFERP55789 205 aa8.67□□□□□ -1.02
GARNL3-216ENST00000481242 SQSTM1Q13501 440 aa8.67□□□□□ -1.02
GARNL3-216ENST00000481242 LAIR1Q6GTX8 287 aa8.67□□□□□ -1.02
GARNL3-216ENST00000481242 BORCS7Q96B45 105 aa8.67□□□□□ -1.02
GARNL3-216ENST00000481242 EHFQ9NZC4 300 aa8.67□□□□□ -1.02
GARNL3-216ENST00000481242 KIR2DS1A0A191URI9 304 aa8.67□□□□□ -1.02
GARNL3-216ENST00000481242 ZNF732B4DXR9 585 aa8.67□□□□□ -1.02
GARNL3-216ENST00000481242 TNFSF14O43557 240 aa8.67□□□□□ -1.02
GARNL3-216ENST00000481242 IFNA10P01566 189 aa8.67□□□□□ -1.02
GARNL3-216ENST00000481242 DRD5P21918 477 aa8.67□□□□□ -1.02
GARNL3-216ENST00000481242 PIGAP37287 484 aa8.67□□□□□ -1.02
GARNL3-216ENST00000481242 KIR2DS4P43632 304 aa8.67□□□□□ -1.02
GARNL3-216ENST00000481242 CCL7P80098 99 aa8.67□□□□□ -1.02
GARNL3-216ENST00000481242 KIR2DS1Q14954 304 aa8.67□□□□□ -1.02
GARNL3-216ENST00000481242 DEFB109BQ30KR1 87 aa8.67□□□□□ -1.02
GARNL3-216ENST00000481242 FAM217AQ8IXS0 508 aa8.67□□□□□ -1.02
GARNL3-216ENST00000481242 FBXL6Q8N531 539 aa8.67□□□□□ -1.02
GARNL3-216ENST00000481242 TP53I13Q8NBR0 393 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms