RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 TMEM255BQ8WV15 326 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 ASB10Q8WXI3 467 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 MCHR2Q969V1 340 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 RCN3Q96D15 328 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 BPIFA2Q96DR5 249 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 RBP7Q96R05 134 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 DOK1Q99704 481 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 MRPL13Q9BYD1 178 aaKnown RBP9.89□□□□□ -0.83
CCM2-213ENST00000480658 SHARPINQ9H0F6 387 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 TXNIPQ9H3M7 391 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 CDH20Q9HBT6 801 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 CCNB1IP1Q9NPC3 277 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 SPAG4Q9NPE6 437 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 NDE1Q9NXR1 346 aa9.89□□□□□ -0.83
CCM2-213ENST00000480658 SAMD4AQ9UPU9 718 aaKnown RBP9.89□□□□□ -0.83
CCM2-213ENST00000480658 USF3Q68DE3 2245 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 A0A1W2PPW3 197 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 H3BSA7 217 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 CXCR6O00574 342 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 COX4I1P13073 169 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 ITGA2P17301 1181 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 TUBG1P23258 451 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 LIPAP38571 399 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 OR1E2P47887 323 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 UGT2B15P54855 530 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 KLF3P57682 345 aaPredicted RBP9.88□□□□□ -0.83
CCM2-213ENST00000480658 HSF2Q03933 536 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 CD47Q08722 323 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 MELKQ14680 651 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 FXNQ16595 210 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 CGB2Q6NT52 195 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 LRFN4Q6PJG9 635 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 FKBP9P1Q75LS8 142 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 SYT9Q86SS6 491 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 OAFQ86UD1 273 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 LRRC17Q8N6Y2 441 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 OR4K5Q8NGD3 323 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 SPATA3Q8NHX4 192 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 ZNF519Q8TB69 540 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 UBASH3BQ8TF42 649 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 ACOT11Q8WXI4 607 aaPredicted RBP9.88□□□□□ -0.83
CCM2-213ENST00000480658 C11orf40Q8WZ69 217 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 ZNF75AQ96N20 296 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 KCTD14Q9BQ13 255 aaPredicted RBP9.88□□□□□ -0.83
CCM2-213ENST00000480658 ZNF416Q9BWM5 594 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 CHODLQ9H9P2 273 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 TUBG2Q9NRH3 451 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 ZNF224Q9NZL3 707 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 EIF3KQ9UBQ5 218 aaKnown RBP9.88□□□□□ -0.83
CCM2-213ENST00000480658 REV1Q9UBZ9 1251 aa9.88□□□□□ -0.83
CCM2-213ENST00000480658 FAM32AQ9Y421 112 aaKnown RBP9.88□□□□□ -0.83
CCM2-213ENST00000480658 ZNF503-AS2A6NEH8 195 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 XKRYO14609 159 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 LMX1BO60663 402 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 STAMBPO95630 424 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 ZNF682O95780 498 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 F13BP05160 661 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 TACSTD2P09758 323 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 IGHV4-31P0DP07 118 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 IFI30P13284 250 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 DRD4P21917 467 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 ACHEP22303 614 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 PRDX6P30041 224 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 NUDT2P50583 147 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 RPL27P61353 136 aaKnown RBP9.87□□□□□ -0.83
CCM2-213ENST00000480658 LIPEQ05469 1076 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 NKPD1Q17RQ9 610 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 SPATS1Q496A3 300 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 TMEM154Q6P9G4 183 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 ZNF730Q6ZMV8 503 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 CBLL1Q75N03 491 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 ZER1Q7Z7L7 766 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 NKAIN4Q8IVV8 208 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 SKA3Q8IX90 412 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 ANKS4BQ8N8V4 417 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 PFN4Q8NHR9 129 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 TMEM158Q8WZ71 300 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 HTRA1Q92743 480 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 FAM162AQ96A26 154 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 COG8Q96MW5 612 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 BPESC1Q9GZL8 116 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 CYSLTR2Q9NS75 346 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 GRHPRQ9UBQ7 328 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 A4GNTQ9UNA3 340 aa9.87□□□□□ -0.83
CCM2-213ENST00000480658 LOC100289279A0A1B0GTE1 492 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 C12orf71A8MTZ7 269 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 EFCAB9A8MZ26 197 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 TRMUO75648 421 aaKnown RBP9.86□□□□□ -0.83
CCM2-213ENST00000480658 TFP02787 698 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 ADRA2AP08913 450 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 ZNF250P15622 560 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 ZNF16P17020 682 aaPredicted RBP9.86□□□□□ -0.83
CCM2-213ENST00000480658 AQP2P41181 271 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 ARHGDIAP52565 204 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 SLC7A2P52569 658 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 TMEM33P57088 247 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 SMIM11AP58511 58 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 PRKCDQ05655 676 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 RAB39AQ14964 217 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 KRT72Q14CN4 511 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms