RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 TNFRSF1BP20333 461 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 SLC9A3P48764 834 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 MRPS34P82930 218 aaKnown RBP12.98□□□□□ -0.33
PRKN-207ENST00000479615 SF3A3Q12874 501 aaKnown RBP eCLIP12.98□□□□□ -0.33
PRKN-207ENST00000479615 GGTLC2Q14390 218 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 RAB39AQ14964 217 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 CARTPTQ16568 116 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 TBC1D28Q2M2D7 210 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 IQCCQ4KMZ1 466 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 IFI44LQ53G44 452 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 THEM4Q5T1C6 240 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 ARMC4Q5T2S8 1044 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 FKBP9P1Q75LS8 142 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 CBLL1Q75N03 491 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 CYP4Z1Q86W10 505 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 WDFY1Q8IWB7 410 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 POU5F2Q8N7G0 328 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 ANKS4BQ8N8V4 417 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 SLC30A7Q8NEW0 376 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 OR4K5Q8NGD3 323 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 UBASH3BQ8TF42 649 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 HPS1Q92902 700 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 RBP7Q96R05 134 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 ZNF347Q96SE7 839 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 ALG12Q9BV10 488 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 BCL2L14Q9BZR8 327 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 ANKRD19PQ9H560 264 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 REV1Q9UBZ9 1251 aa12.98□□□□□ -0.33
PRKN-207ENST00000479615 ARFGEF3Q5TH69 2177 aa12.97□□□□□ -0.33
PRKN-207ENST00000479615 A6NIZ1 184 aa12.97□□□□□ -0.33
PRKN-207ENST00000479615 SHOX2O60902 331 aaPredicted RBP12.97□□□□□ -0.33
PRKN-207ENST00000479615 ADRA2AP08913 450 aa12.97□□□□□ -0.33
PRKN-207ENST00000479615 FAM157CP0CG43 387 aa12.97□□□□□ -0.33
PRKN-207ENST00000479615 IGHV4-31P0DP07 118 aa12.97□□□□□ -0.33
PRKN-207ENST00000479615 SAGP10523 405 aaPredicted RBP12.97□□□□□ -0.33
PRKN-207ENST00000479615 IFI30P13284 250 aa12.97□□□□□ -0.33
PRKN-207ENST00000479615 APEHP13798 732 aaKnown RBP12.97□□□□□ -0.33
PRKN-207ENST00000479615 THBS2P35442 1172 aa12.97□□□□□ -0.33
PRKN-207ENST00000479615 CHN2P52757 468 aa12.97□□□□□ -0.33
PRKN-207ENST00000479615 RAP1BP61224 184 aa12.97□□□□□ -0.33
PRKN-207ENST00000479615 RAP1AP62834 184 aa12.97□□□□□ -0.33
PRKN-207ENST00000479615 MRPS11P82912 194 aaKnown RBP12.97□□□□□ -0.33
PRKN-207ENST00000479615 FAM166AQ6J272 317 aa12.97□□□□□ -0.33
PRKN-207ENST00000479615 C8orf82Q6P1X6 216 aaPredicted RBP12.97□□□□□ -0.33
PRKN-207ENST00000479615 RRM2BQ7LG56 351 aa12.97□□□□□ -0.33
PRKN-207ENST00000479615 FAM156AQ8NDB6 213 aa12.97□□□□□ -0.33
PRKN-207ENST00000479615 RBM15BQ8NDT2 890 aaKnown RBP12.97□□□□□ -0.33
PRKN-207ENST00000479615 ACOT11Q8WXI4 607 aaPredicted RBP12.97□□□□□ -0.33
PRKN-207ENST00000479615 SH3GL3Q99963 347 aa12.97□□□□□ -0.33
PRKN-207ENST00000479615 WACQ9BTA9 647 aa12.97□□□□□ -0.33
PRKN-207ENST00000479615 BEX2Q9BXY8 128 aa12.97□□□□□ -0.33
PRKN-207ENST00000479615 MRPL37Q9BZE1 423 aaKnown RBP12.97□□□□□ -0.33
PRKN-207ENST00000479615 CDH20Q9HBT6 801 aa12.97□□□□□ -0.33
PRKN-207ENST00000479615 RPS6KA6Q9UK32 745 aa12.97□□□□□ -0.33
PRKN-207ENST00000479615 ADAM21Q9UKJ8 722 aa12.97□□□□□ -0.33
PRKN-207ENST00000479615 KCNS2Q9ULS6 477 aa12.97□□□□□ -0.33
PRKN-207ENST00000479615 SH3PXD2BA1X283 911 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 KIAA1324LA8MWY0 1029 aaPredicted RBP12.96□□□□□ -0.33
PRKN-207ENST00000479615 AHCYL1O43865 530 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 LMX1BO60663 402 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 GMNNO75496 209 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 ZNF682O95780 498 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 IGHMP01871 453 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 TACSTD2P09758 323 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 PRDX6P30041 224 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 APLNRP35414 380 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 SLC7A2P52569 658 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 RPL27P61353 136 aaKnown RBP12.96□□□□□ -0.33
PRKN-207ENST00000479615 PRKCDQ05655 676 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 RUNX1T1Q06455 604 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 LAPTM4AQ15012 233 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 RGS7BPQ6MZT1 257 aaPredicted RBP12.96□□□□□ -0.33
PRKN-207ENST00000479615 OAFQ86UD1 273 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 ZNF584Q8IVC4 421 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 ALDH16A1Q8IZ83 802 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 SYT14Q8NB59 555 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 ZNF519Q8TB69 540 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 C11orf40Q8WZ69 217 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 KCTD14Q9BQ13 255 aaPredicted RBP12.96□□□□□ -0.33
PRKN-207ENST00000479615 BPESC1Q9GZL8 116 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 SHARPINQ9H0F6 387 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 NSRP1Q9H0G5 558 aaKnown RBP12.96□□□□□ -0.33
PRKN-207ENST00000479615 CCNB1IP1Q9NPC3 277 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 SLCO1C1Q9NYB5 712 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 TMEM5Q9Y2B1 443 aa12.96□□□□□ -0.33
PRKN-207ENST00000479615 SONP18583 2426 aaKnown RBP12.96□□□□□ -0.34
PRKN-207ENST00000479615 CR1P17927 2039 aa12.95□□□□□ -0.34
PRKN-207ENST00000479615 EFCAB9A8MZ26 197 aa12.95□□□□□ -0.34
PRKN-207ENST00000479615 MT-ND5P03915 603 aa12.95□□□□□ -0.34
PRKN-207ENST00000479615 PATE4P0C8F1 98 aa12.95□□□□□ -0.34
PRKN-207ENST00000479615 HNF1AP20823 631 aa12.95□□□□□ -0.34
PRKN-207ENST00000479615 GSK3BP49841 420 aa12.95□□□□□ -0.34
PRKN-207ENST00000479615 NUDT2P50583 147 aa12.95□□□□□ -0.34
PRKN-207ENST00000479615 TMEM33P57088 247 aa12.95□□□□□ -0.34
PRKN-207ENST00000479615 PCBD1P61457 104 aa12.95□□□□□ -0.34
PRKN-207ENST00000479615 HSF2Q03933 536 aa12.95□□□□□ -0.34
PRKN-207ENST00000479615 CD47Q08722 323 aa12.95□□□□□ -0.34
PRKN-207ENST00000479615 FAM27BQ5VT28 67 aa12.95□□□□□ -0.34
PRKN-207ENST00000479615 ZNF730Q6ZMV8 503 aa12.95□□□□□ -0.34
PRKN-207ENST00000479615 MBOAT2Q6ZWT7 520 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms