RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 ZNF84P51523 738 aa20.2■□□□□ 0.82
C9orf3-215ENST00000478473 VLDLRP98155 873 aa20.2■□□□□ 0.82
C9orf3-215ENST00000478473 PPP2R2BQ00005 443 aa20.2■□□□□ 0.82
C9orf3-215ENST00000478473 RAB39AQ14964 217 aa20.2■□□□□ 0.82
C9orf3-215ENST00000478473 MSMPQ1L6U9 139 aa20.2■□□□□ 0.82
C9orf3-215ENST00000478473 FAM205BPQ63HN1 556 aa20.2■□□□□ 0.82
C9orf3-215ENST00000478473 FKBP9P1Q75LS8 142 aa20.2■□□□□ 0.82
C9orf3-215ENST00000478473 OR4K5Q8NGD3 323 aa20.2■□□□□ 0.82
C9orf3-215ENST00000478473 NEU4Q8WWR8 484 aaPredicted RBP20.2■□□□□ 0.82
C9orf3-215ENST00000478473 MRPL24Q96A35 216 aaKnown RBP20.2■□□□□ 0.82
C9orf3-215ENST00000478473 C7orf34Q96L11 122 aa20.2■□□□□ 0.82
C9orf3-215ENST00000478473 C1orf198Q9H425 327 aa20.2■□□□□ 0.82
C9orf3-215ENST00000478473 GORASP2Q9H8Y8 452 aa20.2■□□□□ 0.82
C9orf3-215ENST00000478473 RHCGQ9UBD6 479 aa20.2■□□□□ 0.82
C9orf3-215ENST00000478473 ANK3Q12955 4377 aaKnown RBP20.2■□□□□ 0.82
C9orf3-215ENST00000478473 A0A1W2PRQ8 180 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 LY6HO94772 140 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 SNAP29O95721 258 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 PATE4P0C8F1 98 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 HSD17B1P14061 328 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 NCK1P16333 377 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 PCSK6P29122 969 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 PDLIM4P50479 330 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 RPL27P61353 136 aaKnown RBP20.19■□□□□ 0.82
C9orf3-215ENST00000478473 DGCR6Q14129 220 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 SLC36A2Q495M3 483 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 IQCCQ4KMZ1 466 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 GLYATQ6IB77 296 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 KRT80Q6KB66 452 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 SLC25A47Q6Q0C1 308 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 SYT14Q8NB59 555 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 ZNF519Q8TB69 540 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 FAM162AQ96A26 154 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 NABP1Q96AH0 204 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 SH3GL3Q99963 347 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 RAB1BQ9H0U4 201 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 SIAEQ9HAT2 523 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 NDUFAF4Q9P032 175 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 SLC7A8Q9UHI5 535 aa20.19■□□□□ 0.82
C9orf3-215ENST00000478473 YLPM1P49750 1951 aaKnown RBP20.18■□□□□ 0.82
C9orf3-215ENST00000478473 LOC390937A0A1W2PQ73 354 aa20.18■□□□□ 0.82
C9orf3-215ENST00000478473 CRLF1O75462 422 aa20.18■□□□□ 0.82
C9orf3-215ENST00000478473 RPS23P62266 143 aaKnown RBP20.18■□□□□ 0.82
C9orf3-215ENST00000478473 TMEM249Q2WGJ8 235 aa20.18■□□□□ 0.82
C9orf3-215ENST00000478473 THEM4Q5T1C6 240 aa20.18■□□□□ 0.82
C9orf3-215ENST00000478473 FOXL2NBQ6ZUU3 175 aa20.18■□□□□ 0.82
C9orf3-215ENST00000478473 CYP4Z1Q86W10 505 aa20.18■□□□□ 0.82
C9orf3-215ENST00000478473 SVOPLQ8N434 492 aa20.18■□□□□ 0.82
C9orf3-215ENST00000478473 SLC7A13Q8TCU3 470 aa20.18■□□□□ 0.82
C9orf3-215ENST00000478473 DHRS1Q96LJ7 313 aa20.18■□□□□ 0.82
C9orf3-215ENST00000478473 FAM107BQ9H098 131 aa20.18■□□□□ 0.82
C9orf3-215ENST00000478473 ZNF346Q9UL40 294 aaKnown RBP20.18■□□□□ 0.82
C9orf3-215ENST00000478473 SAMD4AQ9UPU9 718 aaKnown RBP20.18■□□□□ 0.82
C9orf3-215ENST00000478473 ARL2BPQ9Y2Y0 163 aa20.18■□□□□ 0.82
C9orf3-215ENST00000478473 IGKV1D-43A0A0B4J1Z2 117 aa20.17■□□□□ 0.82
C9orf3-215ENST00000478473 EFCAB9A8MZ26 197 aa20.17■□□□□ 0.82
C9orf3-215ENST00000478473 GPRIN2O60269 458 aa20.17■□□□□ 0.82
C9orf3-215ENST00000478473 PTHP01270 115 aa20.17■□□□□ 0.82
C9orf3-215ENST00000478473 TP53P04637 393 aaPredicted RBP20.17■□□□□ 0.82
C9orf3-215ENST00000478473 SAGP10523 405 aaPredicted RBP20.17■□□□□ 0.82
C9orf3-215ENST00000478473 RHCEP18577 417 aa20.17■□□□□ 0.82
C9orf3-215ENST00000478473 MYBPC1Q00872 1141 aa20.17■□□□□ 0.82
C9orf3-215ENST00000478473 TMEM53Q6P2H8 277 aa20.17■□□□□ 0.82
C9orf3-215ENST00000478473 ZNF730Q6ZMV8 503 aa20.17■□□□□ 0.82
C9orf3-215ENST00000478473 SLC16A14Q7RTX9 510 aa20.17■□□□□ 0.82
C9orf3-215ENST00000478473 OAFQ86UD1 273 aa20.17■□□□□ 0.82
C9orf3-215ENST00000478473 PGAM4Q8N0Y7 254 aa20.17■□□□□ 0.82
C9orf3-215ENST00000478473 ANKS4BQ8N8V4 417 aa20.17■□□□□ 0.82
C9orf3-215ENST00000478473 VRK1Q99986 396 aaPredicted RBP20.17■□□□□ 0.82
C9orf3-215ENST00000478473 CD300AQ9UGN4 299 aa20.17■□□□□ 0.82
C9orf3-215ENST00000478473 EGFL7Q9UHF1 273 aa20.17■□□□□ 0.82
C9orf3-215ENST00000478473 TMEM5Q9Y2B1 443 aa20.17■□□□□ 0.82
C9orf3-215ENST00000478473 SLC22A23A1A5C7 686 aa20.16■□□□□ 0.82
C9orf3-215ENST00000478473 A6NIZ1 184 aa20.16■□□□□ 0.82
C9orf3-215ENST00000478473 CDC42EP2O14613 210 aa20.16■□□□□ 0.82
C9orf3-215ENST00000478473 SYNGR3O43761 229 aa20.16■□□□□ 0.82
C9orf3-215ENST00000478473 USF1P22415 310 aaPredicted RBP20.16■□□□□ 0.82
C9orf3-215ENST00000478473 GIFP27352 417 aa20.16■□□□□ 0.82
C9orf3-215ENST00000478473 NR4A2P43354 598 aa20.16■□□□□ 0.82
C9orf3-215ENST00000478473 CTXN1P60606 82 aa20.16■□□□□ 0.82
C9orf3-215ENST00000478473 RAP1BP61224 184 aa20.16■□□□□ 0.82
C9orf3-215ENST00000478473 RAP1AP62834 184 aa20.16■□□□□ 0.82
C9orf3-215ENST00000478473 GNGT1P63211 74 aa20.16■□□□□ 0.82
C9orf3-215ENST00000478473 GALK2Q01415 458 aa20.16■□□□□ 0.82
C9orf3-215ENST00000478473 SPATS1Q496A3 300 aa20.16■□□□□ 0.82
C9orf3-215ENST00000478473 FAM27BQ5VT28 67 aa20.16■□□□□ 0.82
C9orf3-215ENST00000478473 TBPL2Q6SJ96 375 aa20.16■□□□□ 0.82
C9orf3-215ENST00000478473 CDK20Q8IZL9 346 aa20.16■□□□□ 0.82
C9orf3-215ENST00000478473 RBM15BQ8NDT2 890 aaKnown RBP20.16■□□□□ 0.82
C9orf3-215ENST00000478473 SLC30A7Q8NEW0 376 aa20.16■□□□□ 0.82
C9orf3-215ENST00000478473 OR51A7Q8NH64 312 aa20.16■□□□□ 0.82
C9orf3-215ENST00000478473 FUZQ9BT04 418 aa20.16■□□□□ 0.82
C9orf3-215ENST00000478473 MRPL37Q9BZE1 423 aaKnown RBP20.16■□□□□ 0.82
C9orf3-215ENST00000478473 TRAV27A0A087WT01 109 aa20.15■□□□□ 0.82
C9orf3-215ENST00000478473 AHCYL1O43865 530 aa20.15■□□□□ 0.82
C9orf3-215ENST00000478473 SLC2A10O95528 541 aa20.15■□□□□ 0.82
C9orf3-215ENST00000478473 SEMG1P04279 462 aa20.15■□□□□ 0.82
C9orf3-215ENST00000478473 H1F0P07305 194 aaKnown RBP20.15■□□□□ 0.82
C9orf3-215ENST00000478473 ZNF26P17031 533 aaPredicted RBP20.15■□□□□ 0.82
C9orf3-215ENST00000478473 LIMS1P48059 325 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms