RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 IFNW1P05000 195 aa13.54□□□□□ -0.24
CLDN11-204ENST00000477531 HNF1AP20823 631 aa13.54□□□□□ -0.24
CLDN11-204ENST00000477531 GUCA1AP43080 201 aaPredicted RBP13.54□□□□□ -0.24
CLDN11-204ENST00000477531 CHN2P52757 468 aa13.54□□□□□ -0.24
CLDN11-204ENST00000477531 MYBPC1Q00872 1141 aa13.54□□□□□ -0.24
CLDN11-204ENST00000477531 HSF2Q03933 536 aa13.54□□□□□ -0.24
CLDN11-204ENST00000477531 TAF11Q15544 211 aa13.54□□□□□ -0.24
CLDN11-204ENST00000477531 TBC1D28Q2M2D7 210 aa13.54□□□□□ -0.24
CLDN11-204ENST00000477531 RGS7BPQ6MZT1 257 aaPredicted RBP13.54□□□□□ -0.24
CLDN11-204ENST00000477531 ZNF786Q8N393 782 aa13.54□□□□□ -0.24
CLDN11-204ENST00000477531 RBM15BQ8NDT2 890 aaKnown RBP13.54□□□□□ -0.24
CLDN11-204ENST00000477531 FGFBP3Q8TAT2 258 aa13.54□□□□□ -0.24
CLDN11-204ENST00000477531 LIPHQ8WWY8 451 aa13.54□□□□□ -0.24
CLDN11-204ENST00000477531 HOPXQ9BPY8 73 aaPredicted RBP13.54□□□□□ -0.24
CLDN11-204ENST00000477531 SYT3Q9BQG1 590 aa13.54□□□□□ -0.24
CLDN11-204ENST00000477531 FNDC11Q9BVV2 318 aa13.54□□□□□ -0.24
CLDN11-204ENST00000477531 MRPL13Q9BYD1 178 aaKnown RBP13.54□□□□□ -0.24
CLDN11-204ENST00000477531 TPK1Q9H3S4 243 aa13.54□□□□□ -0.24
CLDN11-204ENST00000477531 EFCAB1Q9HAE3 211 aa13.54□□□□□ -0.24
CLDN11-204ENST00000477531 DNHD1Q96M86 4753 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 YLPM1P49750 1951 aaKnown RBP13.53□□□□□ -0.24
CLDN11-204ENST00000477531 A0A1W2PPW3 197 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 NDUFAB1O14561 156 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 TGFAP01135 160 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 SAGP10523 405 aaPredicted RBP13.53□□□□□ -0.24
CLDN11-204ENST00000477531 COX4I1P13073 169 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 IFI30P13284 250 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 GIFP27352 417 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 MDH1P40925 334 aaKnown RBP13.53□□□□□ -0.24
CLDN11-204ENST00000477531 LIPEQ05469 1076 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 RUNX1T1Q06455 604 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 CD47Q08722 323 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 LAPTM4AQ15012 233 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 FXNQ16595 210 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 HIST3H3Q16695 136 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 ALG10Q5BKT4 473 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 UGT2A3Q6UWM9 527 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 LRRC18Q8N456 261 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 MOSPD2Q8NHP6 518 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 BPIFA2Q96DR5 249 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 RBP7Q96R05 134 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 TXNIPQ9H3M7 391 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 CHODLQ9H9P2 273 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 SIAEQ9HAT2 523 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 CCNB1IP1Q9NPC3 277 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 CMTM6Q9NX76 183 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 FZR1Q9UM11 496 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 A4GNTQ9UNA3 340 aa13.53□□□□□ -0.24
CLDN11-204ENST00000477531 COL6A5A8TX70 2615 aa13.52□□□□□ -0.24
CLDN11-204ENST00000477531 NPIPB13A6NJU9 1138 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 RNF212BA8MTL3 300 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 NPIPB4C9JG80 1138 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 CXCR6O00574 342 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 ZNF682O95780 498 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 LCKP06239 509 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 APLNRP35414 380 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 RAD52P43351 418 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 ALDH3B1P43353 468 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 TRAM2Q15035 370 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 NKPD1Q17RQ9 610 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 C10orf128Q5T292 105 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 FKBP9P1Q75LS8 142 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 RRM2BQ7LG56 351 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 ZNF584Q8IVC4 421 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 SLC15A3Q8IY34 581 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 SPATA3Q8NHX4 192 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 FNDC8Q8TC99 324 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 GEMIN6Q8WXD5 167 aaKnown RBP13.52□□□□□ -0.25
CLDN11-204ENST00000477531 C11orf40Q8WZ69 217 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 MSI2Q96DH6 328 aaKnown RBP13.52□□□□□ -0.25
CLDN11-204ENST00000477531 SEPHS2Q99611 448 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 ALG12Q9BV10 488 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 SMURF2Q9HAU4 748 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 HIF3AQ9Y2N7 669 aa13.52□□□□□ -0.25
CLDN11-204ENST00000477531 PIP5K1CO60331 668 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 TSPAN19P0C672 248 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 FAM157BP0CG42 384 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 CCL2P13500 99 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 SRD5A1P18405 259 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 TCN1P20061 433 aaPredicted RBP13.51□□□□□ -0.25
CLDN11-204ENST00000477531 YAP1P46937 504 aaKnown RBP13.51□□□□□ -0.25
CLDN11-204ENST00000477531 ZNF133P52736 654 aaPredicted RBP13.51□□□□□ -0.25
CLDN11-204ENST00000477531 CTXN1P60606 82 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 RPL27P61353 136 aaKnown RBP13.51□□□□□ -0.25
CLDN11-204ENST00000477531 TOP3AQ13472 1001 aaPredicted RBP13.51□□□□□ -0.25
CLDN11-204ENST00000477531 SGCAQ16586 387 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 MOGQ16653 247 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 MSMPQ1L6U9 139 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 ANKDD1AQ495B1 522 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 IFI44LQ53G44 452 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 ARMC4Q5T2S8 1044 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 FAM205BPQ63HN1 556 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 UNQ6126/PRO20091Q6UXV3 157 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 VTCN1Q7Z7D3 282 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 LRP11Q86VZ4 500 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 CYP4Z1Q86W10 505 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 RNF113BQ8IZP6 322 aaKnown RBP13.51□□□□□ -0.25
CLDN11-204ENST00000477531 OFCC1Q8IZS5 231 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 SYNPRQ8TBG9 265 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 SNX33Q8WV41 574 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms