RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 Q499Y3 187 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 ALKAL1Q6UXT8 129 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 TDHQ8IZJ6 230 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 PLPP7Q8NBV4 271 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 SRPXP78539 464 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 LRRC56Q8IYG6 542 aaPredicted RBP17.09■□□□□ 0.33
VARS2-209ENST00000477288 HSD17B11Q8NBQ5 300 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 RASD2Q96D21 266 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 ITPKCQ96DU7 683 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 TXLNGYQ9BZA5 131 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 DAPP51397 102 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 OPCMLQ14982 345 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 GLYR1Q49A26 553 aaPredicted RBP17.09■□□□□ 0.33
VARS2-209ENST00000477288 SFXN4Q6P4A7 337 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 DBX2Q6ZNG2 339 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 DCXRQ7Z4W1 244 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 CENPOQ9BU64 300 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 TXNDC12O95881 172 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 IRS1P35568 1242 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 NPY4RP50391 375 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 CST9Q5W186 159 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 OR10K1Q8NGX5 313 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 FAM173AQ9BQD7 235 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 OR52A5Q9H2C5 316 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 MED17Q9NVC6 651 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 IGHV3-64DA0A0J9YX35 117 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 PSMB3P49720 205 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 FOXK2Q01167 660 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 ALKBH1Q13686 389 aaKnown RBP17.09■□□□□ 0.33
VARS2-209ENST00000477288 MEP1BQ16820 701 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 FAM122CQ6P4D5 195 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 DPY19L2P2Q6ZN68 376 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 RPS19BP1Q86WX3 136 aaKnown RBP17.09■□□□□ 0.33
VARS2-209ENST00000477288 OR1N1Q8NGS0 311 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 OR2T11Q8NH01 316 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 ISYNA1Q9NPH2 558 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 MBNL1Q9NR56 388 aaKnown RBP17.09■□□□□ 0.33
VARS2-209ENST00000477288 CORINQ9Y5Q5 1042 aa17.09■□□□□ 0.33
VARS2-209ENST00000477288 CTRB1P17538 263 aa17.08■□□□□ 0.33
VARS2-209ENST00000477288 CD1CP29017 333 aa17.08■□□□□ 0.33
VARS2-209ENST00000477288 CTRB2Q6GPI1 263 aa17.08■□□□□ 0.33
VARS2-209ENST00000477288 BCDIN3DQ7Z5W3 292 aaKnown RBP17.08■□□□□ 0.33
VARS2-209ENST00000477288 FAM58AQ8N1B3 248 aa17.08■□□□□ 0.33
VARS2-209ENST00000477288 SELENOFO60613 162 aa17.08■□□□□ 0.33
VARS2-209ENST00000477288 GLIPR1L1Q6UWM5 242 aa17.08■□□□□ 0.33
VARS2-209ENST00000477288 FAM109AQ8N4B1 249 aa17.08■□□□□ 0.33
VARS2-209ENST00000477288 LILRA3Q8N6C8 439 aaPredicted RBP17.08■□□□□ 0.33
VARS2-209ENST00000477288 TRIB1Q96RU8 372 aa17.08■□□□□ 0.33
VARS2-209ENST00000477288 XRCC3O43542 346 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 EMP3P54852 163 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 CRMP1Q14194 572 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 IAH1Q2TAA2 248 aaPredicted RBP17.08■□□□□ 0.32
VARS2-209ENST00000477288 C1orf140Q5VVS0 124 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 H2BFWTQ7Z2G1 175 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 GDF7Q7Z4P5 450 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 UBAC2Q8NBM4 344 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 C11orf40Q8WZ69 217 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 HES7Q9BYE0 225 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 CHD4Q14839 1912 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 NAGAP17050 411 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 LAP3P28838 519 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 LIM2P55344 173 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 FAM74A1Q5RGS3 127 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 GLYATL3Q5SZD4 288 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 NAXDQ8IW45 347 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 FAM185AQ8N0U4 392 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 ZNF511Q8NB15 262 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 SLC37A2Q8TED4 501 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 RPL3LQ92901 407 aaKnown RBP17.08■□□□□ 0.32
VARS2-209ENST00000477288 ELSPBP1Q96BH3 223 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 OR6C76A6NM76 312 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 CNR1P21554 472 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 ETV6P41212 452 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 CSNK1G2P78368 415 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 OR8G1Q15617 311 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 COX20Q5RI15 118 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 STEAP1BQ6NZ63 245 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 SLC48A1Q6P1K1 146 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 TMEM174Q8WUU8 243 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 RNF170Q96K19 258 aa17.08■□□□□ 0.32
VARS2-209ENST00000477288 EDIL3O43854 480 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 PSMB1P20618 241 aaKnown RBP17.07■□□□□ 0.32
VARS2-209ENST00000477288 SERTM2A0A1B0GWG4 89 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 TAGLN2P37802 199 aaKnown RBP17.07■□□□□ 0.32
VARS2-209ENST00000477288 FAM26DQ5JW98 314 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 P2RY12Q9H244 342 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 UFSP2Q9NUQ7 469 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 HLA-HP01893 362 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 CALCBP10092 127 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 PMPCAQ10713 525 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 PHYHD1Q5SRE7 291 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 ZNF626Q68DY1 528 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 MDGA2Q7Z553 956 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 CPEB3Q8NE35 698 aaKnown RBP17.07■□□□□ 0.32
VARS2-209ENST00000477288 OR8U1Q8NH10 309 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 KIRREL1Q96J84 757 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 PRR14Q9BWN1 585 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 NMES1Q9C002 83 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 MRPL22Q9NWU5 206 aaKnown RBP17.07■□□□□ 0.32
VARS2-209ENST00000477288 DEFA6Q01524 100 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms