RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ZNF84P51523 738 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 RPS23P62266 143 aaKnown RBP9.28□□□□□ -0.92
SEC13-214ENST00000476597 MYBPC1Q00872 1141 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 LIPEQ05469 1076 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 RIN1Q13671 783 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 TAF11Q15544 211 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 SLC36A2Q495M3 483 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 C8orf82Q6P1X6 216 aaPredicted RBP9.28□□□□□ -0.92
SEC13-214ENST00000476597 TMEM53Q6P2H8 277 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 CXXC5Q7LFL8 322 aaKnown RBP9.28□□□□□ -0.92
SEC13-214ENST00000476597 SLC16A14Q7RTX9 510 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 HDDC2Q7Z4H3 204 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 SYT14Q8NB59 555 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 SLC30A7Q8NEW0 376 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 NOXO1Q8NFA2 376 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 SPATA3Q8NHX4 192 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 UBASH3BQ8TF42 649 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 LZICQ8WZA0 190 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 HDAC2Q92769 488 aaKnown RBP9.28□□□□□ -0.92
SEC13-214ENST00000476597 NMD3Q96D46 503 aaKnown RBP9.28□□□□□ -0.92
SEC13-214ENST00000476597 BPIFA2Q96DR5 249 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 PRRC1Q96M27 445 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 BEX2Q9BXY8 128 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 TXNIPQ9H3M7 391 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 C1orf198Q9H425 327 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 RNF121Q9H920 327 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 SIAEQ9HAT2 523 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 MED4Q9NPJ6 270 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 STX18Q9P2W9 335 aaKnown RBP9.28□□□□□ -0.92
SEC13-214ENST00000476597 LPAR3Q9UBY5 353 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 HIF3AQ9Y2N7 669 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 SNX13Q9Y5W8 968 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 LYNX1G3V0Z9 82 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 J3KTA2 159 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 M0R233 179 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 CXCR6O00574 342 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 FFAR1O14842 300 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 PIP5K1CO60331 668 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 LILRA1O75019 489 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 PTHP01270 115 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 LYNX1P0DP58 116 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 IFI30P13284 250 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 CCL2P13500 99 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 MAKP20794 623 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 ALDH3B1P43353 468 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 YAP1P46937 504 aaKnown RBP9.27□□□□□ -0.93
SEC13-214ENST00000476597 SEC24CP53992 1094 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 MRPS34P82930 218 aaKnown RBP9.27□□□□□ -0.93
SEC13-214ENST00000476597 PRKCDQ05655 676 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 FHL1Q13642 323 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 ALG10Q5BKT4 473 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 ELFN2Q5R3F8 820 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 FAM166AQ6J272 317 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 CBLL1Q75N03 491 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 VTCN1Q7Z7D3 282 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 TREML1Q86YW5 311 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 RNF113BQ8IZP6 322 aaKnown RBP9.27□□□□□ -0.93
SEC13-214ENST00000476597 PAQR4Q8N4S7 273 aaPredicted RBP9.27□□□□□ -0.93
SEC13-214ENST00000476597 ARIH2OSQ8N7S6 290 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 LRRC75AQ8NAA5 344 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 SYT3Q9BQG1 590 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 TPK1Q9H3S4 243 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 EFCAB1Q9HAE3 211 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 SMURF2Q9HAU4 748 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 MAN2C1Q9NTJ4 1040 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 MYEF2Q9P2K5 600 aaKnown RBP9.27□□□□□ -0.93
SEC13-214ENST00000476597 DUSP13Q9UII6 198 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 ZNF346Q9UL40 294 aaKnown RBP9.27□□□□□ -0.93
SEC13-214ENST00000476597 KCNS2Q9ULS6 477 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 FZR1Q9UM11 496 aa9.27□□□□□ -0.93
SEC13-214ENST00000476597 IGKV1D-43A0A0B4J1Z2 117 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 IQCMA0A1B0GVH7 501 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 LRP5LA4QPB2 252 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 NME4O00746 187 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 GSTA4O15217 222 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 SLC2A10O95528 541 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 SNAP29O95721 258 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 TGFAP01135 160 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 IGHMP01871 453 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 IFNW1P05000 195 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 ZNF250P15622 560 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 TCN1P20061 433 aaPredicted RBP9.26□□□□□ -0.93
SEC13-214ENST00000476597 IGFBP5P24593 272 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 COL8A2P25067 703 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 CDAP32320 146 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 RAD52P43351 418 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 SLC7A2P52569 658 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 CHN2P52757 468 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 UCP2P55851 309 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 RPL27P61353 136 aaKnown RBP9.26□□□□□ -0.93
SEC13-214ENST00000476597 PLP2Q04941 152 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 MAD2L1BPQ15013 274 aaPredicted RBP9.26□□□□□ -0.93
SEC13-214ENST00000476597 TRAM2Q15035 370 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 ANKDD1AQ495B1 522 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 THEM4Q5T1C6 240 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 RGS7BPQ6MZT1 257 aaPredicted RBP9.26□□□□□ -0.93
SEC13-214ENST00000476597 SLC25A47Q6Q0C1 308 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 HACD2Q6Y1H2 254 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 NRMQ8IXM6 262 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 OFCC1Q8IZS5 231 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms