RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 FBXL3Q9UKT7 428 aa20.82■□□□□ 0.92
CPNE1-223ENST00000475146 PMF1-BGLAPU3KQ54 211 aa20.82■□□□□ 0.92
CPNE1-223ENST00000475146 MAP1AP78559 2803 aaPredicted RBP20.81■□□□□ 0.92
CPNE1-223ENST00000475146 SSX4O60224 188 aa20.81■□□□□ 0.92
CPNE1-223ENST00000475146 OR4A8P0C604 315 aa20.81■□□□□ 0.92
CPNE1-223ENST00000475146 SNRPD2P62316 118 aaKnown RBP20.81■□□□□ 0.92
CPNE1-223ENST00000475146 SNTB2Q13425 540 aaKnown RBP20.81■□□□□ 0.92
CPNE1-223ENST00000475146 TNK1Q13470 666 aa20.81■□□□□ 0.92
CPNE1-223ENST00000475146 FHL1Q13642 323 aa20.81■□□□□ 0.92
CPNE1-223ENST00000475146 RAB39AQ14964 217 aa20.81■□□□□ 0.92
CPNE1-223ENST00000475146 ADIPOQQ15848 244 aa20.81■□□□□ 0.92
CPNE1-223ENST00000475146 ZBED5Q49AG3 693 aa20.81■□□□□ 0.92
CPNE1-223ENST00000475146 C10orf128Q5T292 105 aa20.81■□□□□ 0.92
CPNE1-223ENST00000475146 KRT80Q6KB66 452 aa20.81■□□□□ 0.92
CPNE1-223ENST00000475146 SLC16A14Q7RTX9 510 aa20.81■□□□□ 0.92
CPNE1-223ENST00000475146 DHRS1Q96LJ7 313 aa20.81■□□□□ 0.92
CPNE1-223ENST00000475146 TSPAN32Q96QS1 320 aa20.81■□□□□ 0.92
CPNE1-223ENST00000475146 KCNK17Q96T54 332 aa20.81■□□□□ 0.92
CPNE1-223ENST00000475146 ALG12Q9BV10 488 aa20.81■□□□□ 0.92
CPNE1-223ENST00000475146 AURKCQ9UQB9 309 aa20.81■□□□□ 0.92
CPNE1-223ENST00000475146 A6NIZ1 184 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 VSTM5A8MXK1 200 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 H7C417 338 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 PDE5AO76074 875 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 FABP3P05413 133 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 THBS4P35443 961 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 ZNF133P52736 654 aaPredicted RBP20.8■□□□□ 0.92
CPNE1-223ENST00000475146 SMIM11AP58511 58 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 RAP1BP61224 184 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 RAP1AP62834 184 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 ERVK-25P63136 954 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 DAG1Q14118 895 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 SEC23BQ15437 767 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 SLC36A2Q495M3 483 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 NRN1LQ496H8 165 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 IQCCQ4KMZ1 466 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 TMEM53Q6P2H8 277 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 CLEC9AQ6UXN8 241 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 CYP2R1Q6VVX0 501 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 DPPA2Q7Z7J5 298 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 ZNF75AQ96N20 296 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 ZNF442Q9H7R0 627 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 SMURF2Q9HAU4 748 aa20.8■□□□□ 0.92
CPNE1-223ENST00000475146 GADD45GO95257 159 aa20.79■□□□□ 0.92
CPNE1-223ENST00000475146 CDAP32320 146 aa20.79■□□□□ 0.92
CPNE1-223ENST00000475146 OMPP47874 163 aa20.79■□□□□ 0.92
CPNE1-223ENST00000475146 LIMS1P48059 325 aa20.79■□□□□ 0.92
CPNE1-223ENST00000475146 RIPPLY3P57055 190 aa20.79■□□□□ 0.92
CPNE1-223ENST00000475146 SWI5Q1ZZU3 235 aa20.79■□□□□ 0.92
CPNE1-223ENST00000475146 MST1LQ2TV78 715 aa20.79■□□□□ 0.92
CPNE1-223ENST00000475146 RINLQ6ZS11 566 aa20.79■□□□□ 0.92
CPNE1-223ENST00000475146 LRRC18Q8N456 261 aa20.79■□□□□ 0.92
CPNE1-223ENST00000475146 CLDN22Q8N7P3 220 aa20.79■□□□□ 0.92
CPNE1-223ENST00000475146 ZNF519Q8TB69 540 aa20.79■□□□□ 0.92
CPNE1-223ENST00000475146 NMD3Q96D46 503 aaKnown RBP20.79■□□□□ 0.92
CPNE1-223ENST00000475146 RSRC1Q96IZ7 334 aaKnown RBP20.79■□□□□ 0.92
CPNE1-223ENST00000475146 RBP7Q96R05 134 aa20.79■□□□□ 0.92
CPNE1-223ENST00000475146 ACTR3BQ9P1U1 418 aa20.79■□□□□ 0.92
CPNE1-223ENST00000475146 GRHPRQ9UBQ7 328 aa20.79■□□□□ 0.92
CPNE1-223ENST00000475146 ADAM18Q9Y3Q7 739 aa20.79■□□□□ 0.92
CPNE1-223ENST00000475146 SPEF1Q9Y4P9 236 aa20.79■□□□□ 0.92
CPNE1-223ENST00000475146 IGKV1D-43A0A0B4J1Z2 117 aa20.78■□□□□ 0.92
CPNE1-223ENST00000475146 FAM171A2A8MVW0 826 aa20.78■□□□□ 0.92
CPNE1-223ENST00000475146 B9A039 149 aa20.78■□□□□ 0.92
CPNE1-223ENST00000475146 CD14P08571 375 aa20.78■□□□□ 0.92
CPNE1-223ENST00000475146 NPR2P20594 1047 aa20.78■□□□□ 0.92
CPNE1-223ENST00000475146 ATP6V1B2P21281 511 aa20.78■□□□□ 0.92
CPNE1-223ENST00000475146 GALK2Q01415 458 aa20.78■□□□□ 0.92
CPNE1-223ENST00000475146 Q71RC1 249 aaPredicted RBP20.78■□□□□ 0.92
CPNE1-223ENST00000475146 ARHGAP24Q8N264 748 aa20.78■□□□□ 0.92
CPNE1-223ENST00000475146 ARIH2OSQ8N7S6 290 aa20.78■□□□□ 0.92
CPNE1-223ENST00000475146 FNDC8Q8TC99 324 aa20.78■□□□□ 0.92
CPNE1-223ENST00000475146 KCNN2Q9H2S1 579 aa20.78■□□□□ 0.92
CPNE1-223ENST00000475146 UGT2A1Q9Y4X1 527 aa20.78■□□□□ 0.92
CPNE1-223ENST00000475146 MTORP42345 2549 aa20.78■□□□□ 0.92
CPNE1-223ENST00000475146 ZNF469Q96JG9 3925 aaPredicted RBP20.77■□□□□ 0.92
CPNE1-223ENST00000475146 SH3PXD2BA1X283 911 aa20.77■□□□□ 0.92
CPNE1-223ENST00000475146 RNF223E7ERA6 249 aa20.77■□□□□ 0.92
CPNE1-223ENST00000475146 H7C1C5 153 aa20.77■□□□□ 0.92
CPNE1-223ENST00000475146 NDUFB2O95178 105 aa20.77■□□□□ 0.92
CPNE1-223ENST00000475146 SERPINA5P05154 406 aa20.77■□□□□ 0.92
CPNE1-223ENST00000475146 ZNF35P13682 527 aa20.77■□□□□ 0.92
CPNE1-223ENST00000475146 ZNF26P17031 533 aaPredicted RBP20.77■□□□□ 0.92
CPNE1-223ENST00000475146 NR4A1P22736 598 aa20.77■□□□□ 0.92
CPNE1-223ENST00000475146 LCN6P62502 163 aa20.77■□□□□ 0.92
CPNE1-223ENST00000475146 MRPS34P82930 218 aaKnown RBP20.77■□□□□ 0.92
CPNE1-223ENST00000475146 EFNB3Q15768 340 aa20.77■□□□□ 0.92
CPNE1-223ENST00000475146 SGCAQ16586 387 aa20.77■□□□□ 0.92
CPNE1-223ENST00000475146 THEM4Q5T1C6 240 aa20.77■□□□□ 0.92
CPNE1-223ENST00000475146 SLC25A47Q6Q0C1 308 aa20.77■□□□□ 0.92
CPNE1-223ENST00000475146 ZNF584Q8IVC4 421 aa20.77■□□□□ 0.92
CPNE1-223ENST00000475146 ZDHHC21Q8IVQ6 265 aa20.77■□□□□ 0.92
CPNE1-223ENST00000475146 ZNF570Q96NI8 536 aa20.77■□□□□ 0.92
CPNE1-223ENST00000475146 FUZQ9BT04 418 aa20.77■□□□□ 0.92
CPNE1-223ENST00000475146 IL1RAPQ9NPH3 570 aa20.77■□□□□ 0.92
CPNE1-223ENST00000475146 SIGLEC7Q9Y286 467 aa20.77■□□□□ 0.92
CPNE1-223ENST00000475146 UNC119BA6NIH7 251 aa20.76■□□□□ 0.91
CPNE1-223ENST00000475146 XKRYO14609 159 aa20.76■□□□□ 0.91
CPNE1-223ENST00000475146 T-ENOLP0DO92 83 aa20.76■□□□□ 0.91
CPNE1-223ENST00000475146 RRM2P31350 389 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms