RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 A0A1W2PRG6 482 aa15.94■□□□□ 0.14
COL7A1-209ENST00000474432 LRP5LA4QPB2 252 aa15.94■□□□□ 0.14
COL7A1-209ENST00000474432 NPIPB13A6NJU9 1138 aa15.94■□□□□ 0.14
COL7A1-209ENST00000474432 NPIPB4C9JG80 1138 aa15.94■□□□□ 0.14
COL7A1-209ENST00000474432 J3KTA2 159 aa15.94■□□□□ 0.14
COL7A1-209ENST00000474432 SYNGR3O43761 229 aa15.94■□□□□ 0.14
COL7A1-209ENST00000474432 LMX1BO60663 402 aa15.94■□□□□ 0.14
COL7A1-209ENST00000474432 PRSS23O95084 383 aa15.94■□□□□ 0.14
COL7A1-209ENST00000474432 FAM157CP0CG43 387 aa15.94■□□□□ 0.14
COL7A1-209ENST00000474432 CCL2P13500 99 aa15.94■□□□□ 0.14
COL7A1-209ENST00000474432 APEHP13798 732 aaKnown RBP15.94■□□□□ 0.14
COL7A1-209ENST00000474432 MAKP20794 623 aa15.94■□□□□ 0.14
COL7A1-209ENST00000474432 IL2RGP31785 369 aa15.94■□□□□ 0.14
COL7A1-209ENST00000474432 YAP1P46937 504 aaKnown RBP15.94■□□□□ 0.14
COL7A1-209ENST00000474432 CLRN1P58418 232 aa15.94■□□□□ 0.14
COL7A1-209ENST00000474432 LIPEQ05469 1076 aa15.94■□□□□ 0.14
COL7A1-209ENST00000474432 MAD2L1BPQ15013 274 aaPredicted RBP15.94■□□□□ 0.14
COL7A1-209ENST00000474432 ELFN2Q5R3F8 820 aa15.94■□□□□ 0.14
COL7A1-209ENST00000474432 MEX3DQ86XN8 651 aaKnown RBP15.94■□□□□ 0.14
COL7A1-209ENST00000474432 UBASH3BQ8TF42 649 aa15.94■□□□□ 0.14
COL7A1-209ENST00000474432 NABP1Q96AH0 204 aa15.94■□□□□ 0.14
COL7A1-209ENST00000474432 REV1Q9UBZ9 1251 aa15.94■□□□□ 0.14
COL7A1-209ENST00000474432 CDC42EP3Q9UKI2 254 aa15.94■□□□□ 0.14
COL7A1-209ENST00000474432 SPEF1Q9Y4P9 236 aa15.94■□□□□ 0.14
COL7A1-209ENST00000474432 M0R233 179 aa15.93■□□□□ 0.14
COL7A1-209ENST00000474432 SLC2A10O95528 541 aa15.93■□□□□ 0.14
COL7A1-209ENST00000474432 HPXP02790 462 aa15.93■□□□□ 0.14
COL7A1-209ENST00000474432 ALDH3B1P43353 468 aa15.93■□□□□ 0.14
COL7A1-209ENST00000474432 DAP3P51398 398 aaKnown RBP15.93■□□□□ 0.14
COL7A1-209ENST00000474432 FMODQ06828 376 aa15.93■□□□□ 0.14
COL7A1-209ENST00000474432 ST3GAL3Q11203 375 aa15.93■□□□□ 0.14
COL7A1-209ENST00000474432 PODNL1Q6PEZ8 512 aa15.93■□□□□ 0.14
COL7A1-209ENST00000474432 SLC25A47Q6Q0C1 308 aa15.93■□□□□ 0.14
COL7A1-209ENST00000474432 OFCC1Q8IZS5 231 aa15.93■□□□□ 0.14
COL7A1-209ENST00000474432 ZNF540Q8NDQ6 660 aa15.93■□□□□ 0.14
COL7A1-209ENST00000474432 SLC30A7Q8NEW0 376 aa15.93■□□□□ 0.14
COL7A1-209ENST00000474432 BPIFA2Q96DR5 249 aa15.93■□□□□ 0.14
COL7A1-209ENST00000474432 TXNIPQ9H3M7 391 aa15.93■□□□□ 0.14
COL7A1-209ENST00000474432 RHCGQ9UBD6 479 aa15.93■□□□□ 0.14
COL7A1-209ENST00000474432 SLC7A8Q9UHI5 535 aa15.93■□□□□ 0.14
COL7A1-209ENST00000474432 LOC100289279A0A1B0GTE1 492 aa15.92■□□□□ 0.14
COL7A1-209ENST00000474432 MCIDASD6RGH6 385 aa15.92■□□□□ 0.14
COL7A1-209ENST00000474432 MGRN1O60291 552 aa15.92■□□□□ 0.14
COL7A1-209ENST00000474432 FARS2O95363 451 aaKnown RBP15.92■□□□□ 0.14
COL7A1-209ENST00000474432 IFI30P13284 250 aa15.92■□□□□ 0.14
COL7A1-209ENST00000474432 CDAP32320 146 aa15.92■□□□□ 0.14
COL7A1-209ENST00000474432 SLC7A2P52569 658 aa15.92■□□□□ 0.14
COL7A1-209ENST00000474432 ERVS71-1P61550 626 aa15.92■□□□□ 0.14
COL7A1-209ENST00000474432 MRPS34P82930 218 aaKnown RBP15.92■□□□□ 0.14
COL7A1-209ENST00000474432 GALK2Q01415 458 aa15.92■□□□□ 0.14
COL7A1-209ENST00000474432 TRIP10Q15642 601 aa15.92■□□□□ 0.14
COL7A1-209ENST00000474432 IQCCQ4KMZ1 466 aa15.92■□□□□ 0.14
COL7A1-209ENST00000474432 GKAP1Q5VSY0 366 aaPredicted RBP15.92■□□□□ 0.14
COL7A1-209ENST00000474432 CBLL1Q75N03 491 aa15.92■□□□□ 0.14
COL7A1-209ENST00000474432 SLC16A14Q7RTX9 510 aa15.92■□□□□ 0.14
COL7A1-209ENST00000474432 ARPINQ7Z6K5 226 aa15.92■□□□□ 0.14
COL7A1-209ENST00000474432 DPPA2Q7Z7J5 298 aa15.92■□□□□ 0.14
COL7A1-209ENST00000474432 CLDN22Q8N7P3 220 aa15.92■□□□□ 0.14
COL7A1-209ENST00000474432 CPEB3Q8NE35 698 aaKnown RBP15.92■□□□□ 0.14
COL7A1-209ENST00000474432 SMURF2Q9HAU4 748 aa15.92■□□□□ 0.14
COL7A1-209ENST00000474432 AP3M1Q9Y2T2 418 aa15.92■□□□□ 0.14
COL7A1-209ENST00000474432 IGLV3-9A0A075B6K5 115 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 HTR3EA5X5Y0 456 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 CXCR6O00574 342 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 ENTPD5O75356 428 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 SNAP29O95721 258 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 CLPTM1O96005 669 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 IGHMP01871 453 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 FAM157BP0CG42 384 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 TCN1P20061 433 aaPredicted RBP15.91■□□□□ 0.14
COL7A1-209ENST00000474432 COL8A2P25067 703 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 GSK3BP49841 420 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 ZNF84P51523 738 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 RPS23P62266 143 aaKnown RBP15.91■□□□□ 0.14
COL7A1-209ENST00000474432 PRKCDQ05655 676 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 SLC36A2Q495M3 483 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 ALG10Q5BKT4 473 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 FAM166AQ6J272 317 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 TMEM53Q6P2H8 277 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 NRMQ8IXM6 262 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 LRRC18Q8N456 261 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 SPATA3Q8NHX4 192 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 C1orf159Q96HA4 380 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 TSPAN32Q96QS1 320 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 BEX2Q9BXY8 128 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 MS4A5Q9H3V2 200 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 RNF121Q9H920 327 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 SIAEQ9HAT2 523 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 MED4Q9NPJ6 270 aa15.91■□□□□ 0.14
COL7A1-209ENST00000474432 ZNF346Q9UL40 294 aaKnown RBP15.91■□□□□ 0.14
COL7A1-209ENST00000474432 A0A087WUU8 490 aa15.9■□□□□ 0.14
COL7A1-209ENST00000474432 CCDC22O60826 627 aa15.9■□□□□ 0.14
COL7A1-209ENST00000474432 NCR1O76036 304 aa15.9■□□□□ 0.14
COL7A1-209ENST00000474432 ERCC1P07992 297 aaPredicted RBP15.9■□□□□ 0.14
COL7A1-209ENST00000474432 ZNF250P15622 560 aa15.9■□□□□ 0.14
COL7A1-209ENST00000474432 ZNF26P17031 533 aaPredicted RBP15.9■□□□□ 0.14
COL7A1-209ENST00000474432 APEX1P27695 318 aaKnown RBP15.9■□□□□ 0.14
COL7A1-209ENST00000474432 TBPL2Q6SJ96 375 aa15.9■□□□□ 0.14
COL7A1-209ENST00000474432 HACD2Q6Y1H2 254 aa15.9■□□□□ 0.14
COL7A1-209ENST00000474432 IL17RELQ6ZVW7 336 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms