RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 CAV2P51636 162 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 GAS1P54826 345 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 CXADRP78310 365 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 ID3Q02535 119 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 GABRA6Q16445 453 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 GPRC6AQ5T6X5 926 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 NIPAL3Q6P499 406 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 PLXDC2Q6UX71 529 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 GADL1Q6ZQY3 521 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 SSX6Q7RTT6 188 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 LAX1Q8IWV1 398 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 YIPF7Q8N8F6 280 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 ARL14EPQ8N8R7 260 aaPredicted RBP3.14□□□□□ -1.91
UBR3-208ENST00000474426 OR10A6Q8NH74 314 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 PROKR1Q8TCW9 393 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 FLYWCH2Q96CP2 140 aaKnown RBP3.14□□□□□ -1.91
UBR3-208ENST00000474426 REEP6Q96HR9 211 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 SSBP4Q9BWG4 385 aaPredicted RBP3.14□□□□□ -1.91
UBR3-208ENST00000474426 COL25A1Q9BXS0 654 aaPredicted RBP3.14□□□□□ -1.91
UBR3-208ENST00000474426 MRPS28Q9Y2Q9 187 aaKnown RBP3.14□□□□□ -1.91
UBR3-208ENST00000474426 RNF11Q9Y3C5 154 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 OR10H1Q9Y4A9 318 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 ARHGEF40Q8TER5 1519 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 FRMPD1Q5SYB0 1578 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 OR2W5A6NFC9 320 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 ZNF726A6NNF4 738 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 LRATO95237 230 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 TSPAN19P0C672 248 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 IVDP26440 423 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 IL12AP29459 219 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 HTR1FP30939 366 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 CCL11P51671 97 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 MAPK14Q16539 360 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 RABL3Q5HYI8 236 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 TPTE2P1Q5T6R2 138 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 SUSD4Q5VX71 490 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 ZNF787Q6DD87 383 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 ZNF613Q6PF04 617 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 ESPNLQ6ZVH7 1005 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 ANKRD33Q7Z3H0 272 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 DOLPP1Q86YN1 238 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 OR5M9Q8NGP3 310 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 OR2Y1Q8NGV0 311 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 ASB15Q8WXK1 588 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 PTX4Q96A99 478 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 RPEQ96AT9 228 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 SEH1LQ96EE3 360 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 BTN2A3PQ96KV6 586 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 SIGLEC10Q96LC7 697 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 RCHY1Q96PM5 261 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 NEDD4LQ96PU5 975 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 CSF3RQ99062 836 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 DHX35Q9H5Z1 703 aaKnown RBP3.14□□□□□ -1.91
UBR3-208ENST00000474426 CXorf36Q9H7Y0 433 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 TMEM38BQ9NVV0 291 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 SLC9A2Q9UBY0 812 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 SH2B3Q9UQQ2 575 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 LAMP3Q9UQV4 416 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 EXOSC1Q9Y3B2 195 aaKnown RBP3.14□□□□□ -1.91
UBR3-208ENST00000474426 SYNMO15061 1565 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 MAP3K4Q9Y6R4 1608 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 KIF20BQ96Q89 1820 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 A0A087WX48 190 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 LOC100130705A0A1B0GUX0 176 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 PRSS29PA6NIE9 313 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 COLCA2A8K830 154 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 TNFSF15O95150 251 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 IGHG4P01861 327 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 ATP1A1P05023 1023 aaKnown RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 HPNP05981 417 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 THBDP07204 575 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 OR13C7P0DN81 318 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 TDGF1P13385 188 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 NME2P22392 152 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 GDF1P27539 372 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 NBL1P41271 181 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 CDX1P47902 265 aaPredicted RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 RARRES1P49788 294 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 PLP1P60201 277 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 MRPS10P82664 201 aaKnown RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 RAB39AQ14964 217 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 QPRTQ15274 297 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 ASPRV1Q53RT3 343 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 NHLRC3Q5JS37 347 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 LIPKQ5VXJ0 399 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 PWWP2BQ6NUJ5 590 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 C10orf107Q8IVU9 208 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 H1FOOQ8IZA3 346 aaPredicted RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 LFNGQ8NES3 379 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 OR7G2Q8NG99 324 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 OR52I2Q8NH67 350 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 GPR119Q8TDV5 335 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 APOBEC3DQ96AK3 386 aaPredicted RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 LGALS12Q96DT0 336 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 JSRP1Q96MG2 331 aaPredicted RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 KCTD14Q9BQ13 255 aaPredicted RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 RNF26Q9BY78 433 aaPredicted RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 PITPNM3Q9BZ71 974 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 TM6SF1Q9BZW5 370 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 NXF5Q9H1B4 397 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms