RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 ZNF836Q6ZNA1 936 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 TIFABQ6ZNK6 161 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 ABHD13Q7L211 337 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 STRADAQ7RTN6 431 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 NIPA1Q7RTP0 329 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 ASCL5Q7RTU5 278 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 C12orf56Q8IXR9 622 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 PDIK1LQ8N165 341 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 STPG2Q8N412 459 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 FBXL13Q8NEE6 735 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 OR10R2Q8NGX6 335 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 RNF139Q8WU17 664 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 CNDP1Q96KN2 507 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 CEP170P1Q96L14 293 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 P2RX4Q99571 388 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 NMRK1Q9NWW6 199 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 CD84Q9UIB8 345 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 H0YHG0 523 aa2.36□□□□□ -2.03
PTCD3-209ENST00000472044 EEDO75530 441 aaKnown RBP2.36□□□□□ -2.03
PTCD3-209ENST00000472044 CIB2O75838 187 aa2.36□□□□□ -2.03
PTCD3-209ENST00000472044 UTS2O95399 124 aa2.36□□□□□ -2.03
PTCD3-209ENST00000472044 TSPAN13O95857 204 aa2.36□□□□□ -2.03
PTCD3-209ENST00000472044 FOLR1P15328 257 aa2.36□□□□□ -2.03
PTCD3-209ENST00000472044 MAGP20916 626 aa2.36□□□□□ -2.03
PTCD3-209ENST00000472044 HRH1P35367 487 aa2.36□□□□□ -2.03
PTCD3-209ENST00000472044 AQP2P41181 271 aa2.36□□□□□ -2.03
PTCD3-209ENST00000472044 NCBP2P52298 156 aaKnown RBP eCLIP2.36□□□□□ -2.03
PTCD3-209ENST00000472044 PRMT2P55345 433 aa2.36□□□□□ -2.03
PTCD3-209ENST00000472044 YWHAGP61981 247 aaKnown RBP eCLIP2.36□□□□□ -2.03
PTCD3-209ENST00000472044 SLC7A9P82251 487 aa2.36□□□□□ -2.03
PTCD3-209ENST00000472044 XKR7Q5GH72 579 aa2.36□□□□□ -2.03
PTCD3-209ENST00000472044 C19orf35Q6ZS72 473 aa2.36□□□□□ -2.03
PTCD3-209ENST00000472044 LIX1Q8N485 282 aa2.36□□□□□ -2.03
PTCD3-209ENST00000472044 OR10G4Q8NGN3 311 aa2.36□□□□□ -2.03
PTCD3-209ENST00000472044 CXorf40AQ8TE69 158 aa2.36□□□□□ -2.03
PTCD3-209ENST00000472044 ZFP90Q8TF47 636 aa2.36□□□□□ -2.03
PTCD3-209ENST00000472044 ELMO1Q92556 727 aa2.36□□□□□ -2.03
PTCD3-209ENST00000472044 MYCBPQ99417 103 aaPredicted RBP2.36□□□□□ -2.03
PTCD3-209ENST00000472044 ATP5SQ99766 215 aa2.36□□□□□ -2.03
PTCD3-209ENST00000472044 NUP58Q9BVL2 599 aa2.36□□□□□ -2.03
PTCD3-209ENST00000472044 RPF2Q9H7B2 306 aaKnown RBP2.36□□□□□ -2.03
PTCD3-209ENST00000472044 RABL2BQ9UNT1 228 aa2.36□□□□□ -2.03
PTCD3-209ENST00000472044 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.36□□□□□ -2.03
PTCD3-209ENST00000472044 MYO10Q9HD67 2058 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 IGHV3-66A0A0C4DH42 116 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 ANKRD63C9JTQ0 380 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 C11orf94C9JXX5 98 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 CDC7O00311 574 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 ANGPTL7O43827 346 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 WBP4O75554 376 aaKnown RBP2.35□□□□□ -2.03
PTCD3-209ENST00000472044 NAA10P41227 235 aaPredicted RBP2.35□□□□□ -2.03
PTCD3-209ENST00000472044 CDKN1BP46527 198 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 UBE2AP49459 152 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 ACLYP53396 1101 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 CDH6P55285 790 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 LRRC63Q05C16 580 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 PRPSAP1Q14558 356 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 CLINT1Q14677 625 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 TFDP3Q5H9I0 405 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 ARMC12Q5T9G4 340 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 RAET1LQ5VY80 246 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 ANKRD22Q5VYY1 191 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 METAP1DQ6UB28 335 aaPredicted RBP2.35□□□□□ -2.03
PTCD3-209ENST00000472044 TEX43Q6ZNM6 134 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 ZNF493Q6ZR52 646 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 HDDC2Q7Z4H3 204 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 EID2Q8N6I1 236 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 OR4C5Q8NGB2 326 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 OR4S2Q8NH73 311 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 ACMSDQ8TDX5 336 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 ZNF578Q96N58 590 aaPredicted RBP2.35□□□□□ -2.03
PTCD3-209ENST00000472044 CENPKQ9BS16 269 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 SLC40A1Q9NP59 571 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 FGF20Q9NP95 211 aaPredicted RBP2.35□□□□□ -2.03
PTCD3-209ENST00000472044 CTNNA3Q9UI47 895 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 ZNF223Q9UK11 482 aaPredicted RBP2.35□□□□□ -2.03
PTCD3-209ENST00000472044 KIAA1257Q9ULG3 409 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 ING4Q9UNL4 249 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 MN1Q10571 1320 aaPredicted RBP2.35□□□□□ -2.03
PTCD3-209ENST00000472044 CNTNAP1P78357 1384 aa2.35□□□□□ -2.03
PTCD3-209ENST00000472044 TRBV11-1A0A0K0K1C0 115 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 SPECC1L-ADORA2AF8WAN1 911 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 KMOO15229 486 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 CLPXO76031 633 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 RAB3DO95716 219 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 ZNF24P17028 368 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 ZNF32P17041 273 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 GDI1P31150 447 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 OTX1P32242 354 aaPredicted RBP2.34□□□□□ -2.03
PTCD3-209ENST00000472044 LONP1P36776 959 aaKnown RBP2.34□□□□□ -2.03
PTCD3-209ENST00000472044 NUTF2P61970 127 aaKnown RBP2.34□□□□□ -2.03
PTCD3-209ENST00000472044 ADARB1P78563 741 aaKnown RBP2.34□□□□□ -2.03
PTCD3-209ENST00000472044 ECH1Q13011 328 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 SRSF5Q13243 272 aaKnown RBP2.34□□□□□ -2.03
PTCD3-209ENST00000472044 EIF4EBP2Q13542 120 aaPredicted RBP2.34□□□□□ -2.03
PTCD3-209ENST00000472044 EBI3Q14213 229 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 POU2AF1Q16633 256 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 DEFB116Q30KQ4 102 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 ZNF691Q5VV52 312 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 SPECC1LQ69YQ0 1117 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms