RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 CCDC22O60826 627 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 CLPTM1O96005 669 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 EGR1P18146 543 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 CCL8P80075 99 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 PLP2Q04941 152 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 SLC36A2Q495M3 483 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 DCAF12L2Q5VW00 463 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 SLC35D2Q76EJ3 337 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 C1QL2Q7Z5L3 287 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 DHDDSQ86SQ9 333 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 RETREG3Q86VR2 466 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 COMTD1Q86VU5 262 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 TREML1Q86YW5 311 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 ARMC8Q8IUR7 673 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 OR6X1Q8NH79 312 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 ZNF519Q8TB69 540 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 NANPQ8TBE9 248 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 TMEM54Q969K7 222 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 ZNF566Q969W8 418 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 CGREF1Q99674 301 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 CPPED1Q9BRF8 314 aaPredicted RBP11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 BCL2L14Q9BZR8 327 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 G6PC2Q9NQR9 355 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 NKIRAS2Q9NYR9 191 aa11.85□□□□□ -0.51
SEMA3F-208ENST00000470737 IGHV1-69-2A0A0G2JMI3 117 aa11.84□□□□□ -0.51
SEMA3F-208ENST00000470737 IQCMA0A1B0GVH7 501 aa11.84□□□□□ -0.51
SEMA3F-208ENST00000470737 RNF13O43567 381 aa11.84□□□□□ -0.51
SEMA3F-208ENST00000470737 PLPP2O43688 288 aa11.84□□□□□ -0.51
SEMA3F-208ENST00000470737 ZNF250P15622 560 aa11.84□□□□□ -0.51
SEMA3F-208ENST00000470737 CRYBB2P43320 205 aa11.84□□□□□ -0.51
SEMA3F-208ENST00000470737 CDH12P55289 794 aa11.84□□□□□ -0.51
SEMA3F-208ENST00000470737 HFEQ30201 348 aa11.84□□□□□ -0.51
SEMA3F-208ENST00000470737 NHLRC1Q6VVB1 395 aa11.84□□□□□ -0.51
SEMA3F-208ENST00000470737 SLC16A14Q7RTX9 510 aa11.84□□□□□ -0.51
SEMA3F-208ENST00000470737 ZNF584Q8IVC4 421 aa11.84□□□□□ -0.51
SEMA3F-208ENST00000470737 WDFY1Q8IWB7 410 aa11.84□□□□□ -0.51
SEMA3F-208ENST00000470737 FGFBP3Q8TAT2 258 aa11.84□□□□□ -0.51
SEMA3F-208ENST00000470737 RAB1CQ92928 201 aa11.84□□□□□ -0.51
SEMA3F-208ENST00000470737 SLC25A44Q96H78 314 aaPredicted RBP11.84□□□□□ -0.51
SEMA3F-208ENST00000470737 SH3GL1Q99961 368 aa11.84□□□□□ -0.51
SEMA3F-208ENST00000470737 SH3GL3Q99963 347 aa11.84□□□□□ -0.51
SEMA3F-208ENST00000470737 NSRP1Q9H0G5 558 aaKnown RBP11.84□□□□□ -0.51
SEMA3F-208ENST00000470737 TMEM38BQ9NVV0 291 aa11.84□□□□□ -0.51
SEMA3F-208ENST00000470737 ANGPT4Q9Y264 503 aa11.84□□□□□ -0.51
SEMA3F-208ENST00000470737 IGLV3-9A0A075B6K5 115 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 GMNCA6NCL1 334 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 FBP2O00757 339 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 DHHO43323 396 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 SNAP29O95721 258 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 AVPP01185 164 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 HIST1H2ABP04908 130 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 CCL2P13500 99 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 GATA3P23771 443 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 FPR2P25090 351 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 AQP1P29972 269 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 APLNRP35414 380 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 ZNF84P51523 738 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 UCP2P55851 309 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 CLRN1P58418 232 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 CYLC2Q14093 348 aaPredicted RBP11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 MELKQ14680 651 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 TSTQ16762 297 aaKnown RBP11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 ZNF613Q6PF04 617 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 TTC33Q6PID6 262 aaPredicted RBP11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 C1orf229Q6ZS94 237 aaPredicted RBP11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 USP51Q70EK9 711 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 HIST3H2AQ7L7L0 130 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 SLC30A8Q8IWU4 369 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 PCYOX1LQ8NBM8 494 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 RBM15BQ8NDT2 890 aaKnown RBP11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 HIPK4Q8NE63 616 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 OR8J3Q8NGG0 315 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 RP9Q8TA86 221 aaKnown RBP11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 HIST1H2ACQ93077 130 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 ELMOD3Q96FG2 381 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 TSPAN32Q96QS1 320 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 MCHR1Q99705 422 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 SLC6A7Q99884 636 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 RSPO3Q9BXY4 272 aaPredicted RBP11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 TMPRSS13Q9BYE2 586 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 KCNN2Q9H2S1 579 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 IKZF5Q9H5V7 419 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 KAT8Q9H7Z6 458 aaKnown RBP11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 SAP30LQ9HAJ7 183 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 NANSQ9NR45 359 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 DDX28Q9NUL7 540 aaKnown RBP11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 WIPI2Q9Y4P8 454 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 CAPN7Q9Y6W3 813 aa11.83□□□□□ -0.52
SEMA3F-208ENST00000470737 CHP2O43745 196 aa11.82□□□□□ -0.52
SEMA3F-208ENST00000470737 SNX3O60493 162 aa11.82□□□□□ -0.52
SEMA3F-208ENST00000470737 FMO6PO60774 539 aa11.82□□□□□ -0.52
SEMA3F-208ENST00000470737 CH25HO95992 272 aa11.82□□□□□ -0.52
SEMA3F-208ENST00000470737 IGHV2-5P01817 119 aa11.82□□□□□ -0.52
SEMA3F-208ENST00000470737 IGHG1P01857 330 aa11.82□□□□□ -0.52
SEMA3F-208ENST00000470737 QDPRP09417 244 aa11.82□□□□□ -0.52
SEMA3F-208ENST00000470737 UMPSP11172 480 aa11.82□□□□□ -0.52
SEMA3F-208ENST00000470737 HSF2Q03933 536 aa11.82□□□□□ -0.52
SEMA3F-208ENST00000470737 SLC3A1Q07837 685 aa11.82□□□□□ -0.52
SEMA3F-208ENST00000470737 ZP4Q12836 540 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms