RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 THEM4Q5T1C6 240 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 SLC25A47Q6Q0C1 308 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 CYP2R1Q6VVX0 501 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 TRPM8Q7Z2W7 1104 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 DPPA2Q7Z7J5 298 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 IGFN1Q86VF2 1251 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 OR52J3Q8NH60 311 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 FNDC8Q8TC99 324 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 C18orf12Q96KH6 178 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 TSPAN32Q96QS1 320 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 BDH2Q9BUT1 245 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 CACNG6Q9BXT2 260 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 CA10Q9NS85 328 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 FBXL3Q9UKT7 428 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 PRPF19Q9UMS4 504 aaKnown RBP12.26□□□□□ -0.45
TOP3B-215ENST00000470338 SIGLEC7Q9Y286 467 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 SETD2Q9BYW2 2564 aaPredicted RBP12.25□□□□□ -0.45
TOP3B-215ENST00000470338 IGKV1D-43A0A0B4J1Z2 117 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 TCRBV5S2A0A599 114 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 A6NIZ1 184 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 H7C417 338 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 NDUFS7O75251 213 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 PDE5AO76074 875 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 GADD45GO95257 159 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 FARS2O95363 451 aaKnown RBP12.25□□□□□ -0.45
TOP3B-215ENST00000470338 SLC2A10O95528 541 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 CD14P08571 375 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 PATE4P0C8F1 98 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 ZNF35P13682 527 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 GIPRP48546 466 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 PTDSS1P48651 473 aaKnown RBP12.25□□□□□ -0.45
TOP3B-215ENST00000470338 RAP1BP61224 184 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 RAP1AP62834 184 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 MRPS34P82930 218 aaKnown RBP12.25□□□□□ -0.45
TOP3B-215ENST00000470338 MS4A2Q01362 244 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 CHRNB3Q05901 458 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 TOP3AQ13472 1001 aaPredicted RBP12.25□□□□□ -0.45
TOP3B-215ENST00000470338 LCN8Q6JVE9 175 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 DNM1P46Q6ZS02 220 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 ZDHHC21Q8IVQ6 265 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 ARIH2OSQ8N7S6 290 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 MS4A3Q96HJ5 214 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 RBP7Q96R05 134 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 SH3GL3Q99963 347 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 SIAEQ9HAT2 523 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 GDF2Q9UK05 429 aaPredicted RBP12.25□□□□□ -0.45
TOP3B-215ENST00000470338 UGT2A1Q9Y4X1 527 aa12.25□□□□□ -0.45
TOP3B-215ENST00000470338 NDUFB2O95178 105 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 RAB36O95755 333 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 SERPINA5P05154 406 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 INHBBP09529 407 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 BMP4P12644 408 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 NPR2P20594 1047 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 NR4A1P22736 598 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 RPL4P36578 427 aaKnown RBP12.24□□□□□ -0.45
TOP3B-215ENST00000470338 SERPINF1P36955 418 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 MAGEA2P43356 314 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 HMGA2P52926 109 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 FXYD6P3P58550 94 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 ERVK-25P63136 954 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 SPIBQ01892 262 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 FMODQ06828 376 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 CD47Q08722 323 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 RAB39AQ14964 217 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 ADIPOQQ15848 244 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 NIPBLQ6KC79 2804 aaeCLIP12.24□□□□□ -0.452e-6■■■■□ 19.3
TOP3B-215ENST00000470338 FAM122BQ7Z309 247 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 ZER1Q7Z7L7 766 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 DHFR2Q86XF0 187 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 ZNF584Q8IVC4 421 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 CIARTQ8N365 385 aaPredicted RBP12.24□□□□□ -0.45
TOP3B-215ENST00000470338 CLDN22Q8N7P3 220 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 HTRA1Q92743 480 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 NABP1Q96AH0 204 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 RSRC1Q96IZ7 334 aaKnown RBP12.24□□□□□ -0.45
TOP3B-215ENST00000470338 COX4I2Q96KJ9 171 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 GPX7Q96SL4 187 aaPredicted RBP12.24□□□□□ -0.45
TOP3B-215ENST00000470338 GPA33Q99795 319 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 NDEL1Q9GZM8 345 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 ZNF442Q9H7R0 627 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 BARX1Q9HBU1 254 aaPredicted RBP12.24□□□□□ -0.45
TOP3B-215ENST00000470338 KRCC1Q9NPI7 259 aaPredicted RBP12.24□□□□□ -0.45
TOP3B-215ENST00000470338 NRIP3Q9NQ35 241 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 GRHPRQ9UBQ7 328 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 AURKCQ9UQB9 309 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 ADAM18Q9Y3Q7 739 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 PMF1-BGLAPU3KQ54 211 aa12.24□□□□□ -0.45
TOP3B-215ENST00000470338 CR1P17927 2039 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 TRIM64A6NGJ6 449 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 TRIM64BA6NI03 449 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 UNC119BA6NIH7 251 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 B9A039 149 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 AHCYL1O43865 530 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 KRT36O76013 467 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 MMP7P09237 267 aaPredicted RBP12.23□□□□□ -0.45
TOP3B-215ENST00000470338 OR4A8P0C604 315 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 RRM2P31350 389 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 CDAP32320 146 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 THBS4P35443 961 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 DAG1Q14118 895 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms