RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 SLC38A1Q9H2H9 487 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 TRIM45Q9H8W5 580 aaPredicted RBP3.27□□□□□ -1.89
COL11A1-208ENST00000470170 ZNF702PQ9H963 129 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 CD209Q9NNX6 404 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 VCX3AQ9NNX9 186 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 DPM3Q9P2X0 92 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 WARS2Q9UGM6 360 aaKnown RBP3.27□□□□□ -1.89
COL11A1-208ENST00000470170 RAB23Q9ULC3 237 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 NEU3Q9UQ49 428 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 POFUT2Q9Y2G5 429 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 FADS3Q9Y5Q0 445 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 FKBP7Q9Y680 259 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 V9GYQ6 96 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 FGD5Q6ZNL6 1462 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 A0A1B0GTI1 187 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 LRRN3E7EW58 273 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 OR7A17O14581 309 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 TOX3O15405 576 aaPredicted RBP3.26□□□□□ -1.89
COL11A1-208ENST00000470170 XRCC2O43543 280 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 HUS1O60921 280 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 WNT2P09544 360 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 CT45A10P0DMU9 189 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 ANXA3P12429 323 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 BGNP21810 368 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 PRDX3P30048 256 aaKnown RBP3.26□□□□□ -1.89
COL11A1-208ENST00000470170 HPCAL1P37235 193 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 CSNK1DP48730 415 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 TGM4P49221 684 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 ATP5J2P56134 94 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 AP3S2P59780 193 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 GPX6P59796 221 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 PITPNAQ00169 270 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 ZNF33BQ06732 778 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 SLAMF1Q13291 335 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 MRPL23Q16540 153 aaKnown RBP3.26□□□□□ -1.89
COL11A1-208ENST00000470170 SLC5A12Q1EHB4 618 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 BEND3Q5T5X7 828 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 STUMQ69YW2 141 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 UQCC3Q6UW78 93 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 TMPRSS11AQ6ZMR5 421 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 SLC16A14Q7RTX9 510 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 ANKRD37Q7Z713 158 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 TRIM69Q86WT6 500 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 MKXQ8IYA7 352 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 ZNF786Q8N393 782 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 LIX1Q8N485 282 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 JAGN1Q8N5M9 183 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 NUBPLQ8TB37 319 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 RDH11Q8TC12 318 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 TFB1MQ8WVM0 346 aaKnown RBP3.26□□□□□ -1.89
COL11A1-208ENST00000470170 ACOT11Q8WXI4 607 aaPredicted RBP3.26□□□□□ -1.89
COL11A1-208ENST00000470170 CELF6Q96J87 481 aaKnown RBP3.26□□□□□ -1.89
COL11A1-208ENST00000470170 CEP19Q96LK0 163 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 SLC40A1Q9NP59 571 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 ZNF282Q9UDV7 671 aaPredicted RBP3.26□□□□□ -1.89
COL11A1-208ENST00000470170 NUP50Q9UKX7 468 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 FZR1Q9UM11 496 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 POLDIP2Q9Y2S7 368 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 PRG3Q9Y2Y8 225 aaPredicted RBP3.26□□□□□ -1.89
COL11A1-208ENST00000470170 MEMO1Q9Y316 297 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 TIMM10BQ9Y5J6 103 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 SAR1BQ9Y6B6 198 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 CDH10Q9Y6N8 788 aa3.26□□□□□ -1.89
COL11A1-208ENST00000470170 RPAP1Q9BWH6 1393 aaPredicted RBP3.25□□□□□ -1.89
COL11A1-208ENST00000470170 NISCHQ9Y2I1 1504 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 NACAE9PAV3 2078 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 AQRO60306 1485 aaKnown RBP eCLIP3.25□□□□□ -1.89
COL11A1-208ENST00000470170 ARHGAP23Q9P227 1491 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 E5RI56 91 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 H0YL77 283 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 KLRC4-KLRK1H3BQV0 150 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 SIVA1O15304 175 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 AIREO43918 545 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 DIRAS1O95057 198 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 SCELO95171 688 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 FARS2O95363 451 aaKnown RBP3.25□□□□□ -1.89
COL11A1-208ENST00000470170 DEXIO95424 95 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 RAB3DO95716 219 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 ALDOBP05062 364 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 H2BFMP0C1H6 154 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 SLC35E2BP0CK96 405 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 SMIM10L1P0DMW3 83 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 PGCP20142 388 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 IMPDH1P20839 514 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 MAGP20916 626 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 GABRR2P28476 465 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 IFNA8P32881 189 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 CFHR2P36980 270 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 SLC1A2P43004 574 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 MAGEA5P43359 124 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 SERPINB9P50453 376 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 DIO3P55073 304 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 VSNL1P62760 191 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 RPL10AP62906 217 aaKnown RBP3.25□□□□□ -1.89
COL11A1-208ENST00000470170 ERVK-25P63136 954 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 S100A12P80511 92 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 MRPS6P82932 125 aaKnown RBP3.25□□□□□ -1.89
COL11A1-208ENST00000470170 EWSR1Q01844 656 aaKnown RBP eCLIP3.25□□□□□ -1.89
COL11A1-208ENST00000470170 MED21Q13503 144 aa3.25□□□□□ -1.89
COL11A1-208ENST00000470170 KLHL38Q2WGJ6 581 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms