RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 UBA52P62987 128 aaKnown RBP9.09□□□□□ -0.95
NUP50-214ENST00000469163 MEF2DQ14814 521 aa9.09□□□□□ -0.95
NUP50-214ENST00000469163 RPE65Q16518 533 aa9.09□□□□□ -0.95
NUP50-214ENST00000469163 NKAPLQ5M9Q1 402 aa9.09□□□□□ -0.95
NUP50-214ENST00000469163 DCAF10Q5QP82 559 aa9.09□□□□□ -0.95
NUP50-214ENST00000469163 CPTPQ5TA50 214 aa9.09□□□□□ -0.95
NUP50-214ENST00000469163 PLAG1Q6DJT9 500 aa9.09□□□□□ -0.95
NUP50-214ENST00000469163 OR10K2Q6IF99 312 aa9.09□□□□□ -0.95
NUP50-214ENST00000469163 HIST3H2AQ7L7L0 130 aa9.09□□□□□ -0.95
NUP50-214ENST00000469163 ZNF664Q8N3J9 261 aa9.09□□□□□ -0.95
NUP50-214ENST00000469163 EID2Q8N6I1 236 aa9.09□□□□□ -0.95
NUP50-214ENST00000469163 BEND2Q8NDZ0 799 aa9.09□□□□□ -0.95
NUP50-214ENST00000469163 NETO1Q8TDF5 533 aa9.09□□□□□ -0.95
NUP50-214ENST00000469163 HIST1H2ACQ93077 130 aa9.09□□□□□ -0.95
NUP50-214ENST00000469163 PTCHD1Q96NR3 888 aa9.09□□□□□ -0.95
NUP50-214ENST00000469163 S100A13Q99584 98 aa9.09□□□□□ -0.95
NUP50-214ENST00000469163 BARX1Q9HBU1 254 aaPredicted RBP9.09□□□□□ -0.95
NUP50-214ENST00000469163 SNX11Q9Y5W9 270 aa9.09□□□□□ -0.95
NUP50-214ENST00000469163 NPTNQ9Y639 398 aa9.09□□□□□ -0.95
NUP50-214ENST00000469163 IGF2RP11717 2491 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 KANTRA0A1W2PQU2 76 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 VSTM5A8MXK1 200 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 LDB3O75112 727 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 SCELO95171 688 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 IL3P08700 152 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 LAMP1P11279 417 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 MNDAP41218 407 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 KIR3DL1P43629 444 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 VLDLRP98155 873 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 ZXDCQ2QGD7 858 aaPredicted RBP9.08□□□□□ -0.96
NUP50-214ENST00000469163 PTCHD4Q6ZW05 846 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 MOB3CQ70IA8 216 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 FAM98AQ8NCA5 519 aaKnown RBP9.08□□□□□ -0.96
NUP50-214ENST00000469163 GNPDA2Q8TDQ7 276 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 PPCDCQ96CD2 204 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 CMTM7Q96FZ5 175 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 ZNF75AQ96N20 296 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 ALKBH3Q96Q83 286 aaPredicted RBP9.08□□□□□ -0.96
NUP50-214ENST00000469163 IL4I1Q96RQ9 567 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 CDC6Q99741 560 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 HDAC8Q9BY41 377 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 C20orf85Q9H1P6 137 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 GSX1Q9H4S2 264 aaPredicted RBP9.08□□□□□ -0.96
NUP50-214ENST00000469163 TPT1P8Q9HAU6 139 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 TRPV4Q9HBA0 871 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 NOX3Q9HBY0 568 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 FBXL3Q9UKT7 428 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 PIEZO1Q92508 2521 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 A0A087WZY1 265 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 GALR3O60755 368 aaPredicted RBP9.08□□□□□ -0.96
NUP50-214ENST00000469163 SNAPC5O75971 98 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 ADRA2AP08913 450 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 UCHL1P09936 223 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 CD82P27701 267 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 CEACAM6P40199 344 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 MRPL19P49406 292 aaKnown RBP9.08□□□□□ -0.96
NUP50-214ENST00000469163 PTTG1IPP53801 180 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 GFERP55789 205 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 PPIAP62937 165 aaKnown RBP9.08□□□□□ -0.96
NUP50-214ENST00000469163 NOXRED1Q6NXP6 359 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 GPR135Q8IZ08 494 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 SMPDL3AQ92484 453 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 NRSN2Q9GZP1 204 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 DCAF13Q9NV06 445 aaKnown RBP9.08□□□□□ -0.96
NUP50-214ENST00000469163 OBP2AQ9NY56 170 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 PIPOXQ9P0Z9 390 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 NCDNQ9UBB6 729 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 ALPK3Q96L96 1907 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 C20orf202A1L168 122 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 GABRR3A8MPY1 467 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 TP53I11O14683 189 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 BCAT2O15382 392 aaPredicted RBP9.08□□□□□ -0.96
NUP50-214ENST00000469163 PRAMEF4O60810 478 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 CSTAP01040 98 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 ARG1P05089 322 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 NPPBP16860 134 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 CCR8P51685 355 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 OR1D5P58170 312 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 KHDC3LQ587J8 217 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 TRIM61Q5EBN2 209 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 RPS26P11Q5JNZ5 115 aaPredicted RBP9.08□□□□□ -0.96
NUP50-214ENST00000469163 GFI1BQ5VTD9 330 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 PRPF38BQ5VTL8 546 aaKnown RBP9.08□□□□□ -0.96
NUP50-214ENST00000469163 PRAMEF9Q5VWM5 478 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 PAQR6Q6TCH4 344 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 TRIM46Q7Z4K8 759 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 LAPTM4BQ86VI4 370 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 PPP1R3BQ86XI6 285 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 OR10R2Q8NGX6 335 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 HAVCR2Q8TDQ0 301 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 SGCZQ96LD1 299 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 PACRGQ96M98 296 aaPredicted RBP9.08□□□□□ -0.96
NUP50-214ENST00000469163 ELF4Q99607 663 aaPredicted RBP9.08□□□□□ -0.96
NUP50-214ENST00000469163 URM1Q9BTM9 101 aaKnown RBP9.08□□□□□ -0.96
NUP50-214ENST00000469163 OR52A5Q9H2C5 316 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 TMEM74BQ9NUR3 256 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 CLN6Q9NWW5 311 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 DKKL1Q9UK85 242 aa9.08□□□□□ -0.96
NUP50-214ENST00000469163 TECTAO75443 2155 aa9.07□□□□□ -0.96
NUP50-214ENST00000469163 BOD1L1Q8NFC6 3051 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms