RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 A0A0G2JN53 185 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 GLYATL1P3A0A0U1RQE8 302 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 SIRPB1O00241 398 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 CHST1O43916 411 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 HUS1O60921 280 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 AIFM1O95831 613 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 POLR2MP0CAP2 368 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 CALM1P0DP23 149 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 CALM2P0DP24 149 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 CALM3P0DP25 149 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 RALBP11234 206 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 AQP2P41181 271 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 MAGEA1P43355 309 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 TNNT2P45379 298 aaPredicted RBP2.87□□□□□ -1.95
VPS13A-209ENST00000467124 KRTAP10-7P60409 375 aaPredicted RBP2.87□□□□□ -1.95
VPS13A-209ENST00000467124 RPS21P63220 83 aaKnown RBP2.87□□□□□ -1.95
VPS13A-209ENST00000467124 SLC25A11Q02978 314 aaKnown RBP2.87□□□□□ -1.95
VPS13A-209ENST00000467124 DAZ2Q13117 558 aaKnown RBP2.87□□□□□ -1.95
VPS13A-209ENST00000467124 DOC2AQ14183 400 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 WDR43Q15061 677 aaKnown RBP eCLIP2.87□□□□□ -1.95
VPS13A-209ENST00000467124 GUCA2BQ16661 112 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 CCDC14Q49A88 953 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 NCCRP1Q6ZVX7 275 aaPredicted RBP2.87□□□□□ -1.95
VPS13A-209ENST00000467124 IQCKQ8N0W5 287 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 PQLC3Q8N755 202 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 VN1R2Q8NFZ6 395 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 OR4C5Q8NGB2 326 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 OR52E5Q8NH55 327 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 MARCH1Q8TCQ1 289 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 DTX3LQ8TDB6 740 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 CA5BP1Q8WTZ4 195 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 PIBF1Q8WXW3 757 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 FRAT1Q92837 279 aaPredicted RBP2.87□□□□□ -1.95
VPS13A-209ENST00000467124 PHYHIPLQ96FC7 376 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 IMMP1LQ96LU5 166 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 GSDMAQ96QA5 445 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 KCTD14Q9BQ13 255 aaPredicted RBP2.87□□□□□ -1.95
VPS13A-209ENST00000467124 BCL7BQ9BQE9 202 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 HDHD3Q9BSH5 251 aaPredicted RBP2.87□□□□□ -1.95
VPS13A-209ENST00000467124 OR11A1Q9GZK7 315 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 ELOVL6Q9H5J4 265 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 LYRM4Q9HD34 91 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 DAZ3Q9NR90 486 aaKnown RBP2.87□□□□□ -1.95
VPS13A-209ENST00000467124 PRR34Q9NV39 138 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 GPATCH2LQ9NWQ4 482 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 HRASLS2Q9NWW9 162 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 GOLT1BQ9Y3E0 138 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 UBN2Q6ZU65 1347 aa2.87□□□□□ -1.95
VPS13A-209ENST00000467124 ARPC4-TTLL3A0A0A6YYG9 625 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 TRAV25A0A0B4J276 109 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 A0A1B0GTQ1 180 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 SPECC1L-ADORA2AF8WAN1 911 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 KRTAP4-16G5E9R7 235 aaPredicted RBP2.86□□□□□ -1.95
VPS13A-209ENST00000467124 SLC9A3R1O14745 358 aaPredicted RBP2.86□□□□□ -1.95
VPS13A-209ENST00000467124 KMOO15229 486 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 EIF4E2O60573 245 aaKnown RBP2.86□□□□□ -1.95
VPS13A-209ENST00000467124 CCNB2O95067 398 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 UTS2O95399 124 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 OTX1P32242 354 aaPredicted RBP2.86□□□□□ -1.95
VPS13A-209ENST00000467124 MAS1LP35410 378 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 SERPINB5P36952 375 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 CX3CR1P49238 355 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 SSR4P51571 173 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 CCR8P51685 355 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 RND2P52198 227 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 NUP107P57740 925 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 KRTAP10-12P60413 245 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 TWF1Q12792 350 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 PSG7Q13046 419 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 RFX4Q33E94 735 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 PTPN20Q4JDL3 420 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 VAX1Q5SQQ9 334 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 SPECC1LQ69YQ0 1117 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 ZNF621Q6ZSS3 439 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 OTUD6AQ7L8S5 288 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 SSX9Q7RTT3 188 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 SCD5Q86SK9 330 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 SPAG16Q8N0X2 631 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 OR1N2Q8NGR9 330 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 NUBPLQ8TB37 319 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 TSEN15Q8WW01 171 aaKnown RBP2.86□□□□□ -1.95
VPS13A-209ENST00000467124 MYDGFQ969H8 173 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 EEF1AKMT3Q96AZ1 226 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 SERPINB12Q96P63 405 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 UCK2Q9BZX2 261 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 ACTR3CQ9C0K3 210 aaPredicted RBP2.86□□□□□ -1.95
VPS13A-209ENST00000467124 DNTTIP1Q9H147 329 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 SLC25A37Q9NYZ2 338 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 ST3GAL6Q9Y274 331 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 SLC17A4Q9Y2C5 497 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 RHBDD3Q9Y3P4 386 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 F11RQ9Y624 299 aaKnown RBP2.86□□□□□ -1.95
VPS13A-209ENST00000467124 CEMIPQ8WUJ3 1361 aa2.86□□□□□ -1.95
VPS13A-209ENST00000467124 CASC3O15234 703 aaKnown RBP2.85□□□□□ -1.95
VPS13A-209ENST00000467124 SIVA1O15304 175 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 UBCP0CG48 685 aaKnown RBP2.85□□□□□ -1.95
VPS13A-209ENST00000467124 CCNB1P14635 433 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 HPGDP15428 266 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 AK4P27144 223 aaPredicted RBP2.85□□□□□ -1.95
VPS13A-209ENST00000467124 OR1E1P30953 314 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms