RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 OR6C68A6NDL8 312 aa13.36□□□□□ -0.27
NPHP4-205ENST00000466897 H0YAE9 185 aa13.36□□□□□ -0.27
NPHP4-205ENST00000466897 PAICSP22234 425 aaKnown RBP13.36□□□□□ -0.27
NPHP4-205ENST00000466897 GGT2P36268 569 aa13.36□□□□□ -0.27
NPHP4-205ENST00000466897 PEX19P40855 299 aa13.36□□□□□ -0.27
NPHP4-205ENST00000466897 CDC42P60953 191 aa13.36□□□□□ -0.27
NPHP4-205ENST00000466897 CRMP1Q14194 572 aa13.36□□□□□ -0.27
NPHP4-205ENST00000466897 CEACAM16Q2WEN9 425 aa13.36□□□□□ -0.27
NPHP4-205ENST00000466897 ZIK1Q3SY52 487 aaPredicted RBP13.36□□□□□ -0.27
NPHP4-205ENST00000466897 TTC23Q5W5X9 447 aa13.36□□□□□ -0.27
NPHP4-205ENST00000466897 FBXW10Q5XX13 1052 aa13.36□□□□□ -0.27
NPHP4-205ENST00000466897 OR7E24Q6IFN5 339 aa13.36□□□□□ -0.27
NPHP4-205ENST00000466897 STAC2Q6ZMT1 411 aa13.36□□□□□ -0.27
NPHP4-205ENST00000466897 CXorf67Q86X51 503 aaPredicted RBP13.36□□□□□ -0.27
NPHP4-205ENST00000466897 C17orf78Q8N4C9 275 aa13.36□□□□□ -0.27
NPHP4-205ENST00000466897 ZNF433Q8N7K0 673 aaPredicted RBP13.36□□□□□ -0.27
NPHP4-205ENST00000466897 ZNF555Q8NEP9 628 aa13.36□□□□□ -0.27
NPHP4-205ENST00000466897 TRUB1Q8WWH5 349 aaKnown RBP13.36□□□□□ -0.27
NPHP4-205ENST00000466897 PLEKHA8Q96JA3 519 aa13.36□□□□□ -0.27
NPHP4-205ENST00000466897 RACGAP1Q9H0H5 632 aa13.36□□□□□ -0.27
NPHP4-205ENST00000466897 USP9XQ93008 2570 aaPredicted RBP13.35□□□□□ -0.27
NPHP4-205ENST00000466897 TENM4Q6N022 2769 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 LOC100130705A0A1B0GUX0 176 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 NKX2-6A6NCS4 301 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 H7C1C5 153 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 KHDRBS3O75525 346 aaKnown RBP13.35□□□□□ -0.27
NPHP4-205ENST00000466897 SLC2A10O95528 541 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 HOXB1P14653 301 aaPredicted RBP13.35□□□□□ -0.27
NPHP4-205ENST00000466897 CTLA4P16410 223 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 UGT2B10P36537 528 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 VHLP40337 213 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 CENPAP49450 140 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 ZNF84P51523 738 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 LCN6P62502 163 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 ADARB1P78563 741 aaKnown RBP13.35□□□□□ -0.27
NPHP4-205ENST00000466897 MRPS34P82930 218 aaKnown RBP13.35□□□□□ -0.27
NPHP4-205ENST00000466897 FMODQ06828 376 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 IL18R1Q13478 541 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 SNAPC1Q16533 368 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 ANKRD16Q6P6B7 361 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 SSX8Q7RTT4 187 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 P2RY8Q86VZ1 359 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 DHRSXQ8N5I4 330 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 STEAP2Q8NFT2 490 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 OR8J1Q8NGP2 316 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 OR2T4Q8NH00 348 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 KISS1RQ969F8 398 aaPredicted RBP13.35□□□□□ -0.27
NPHP4-205ENST00000466897 MUS81Q96NY9 551 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 FOXB1Q99853 325 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 NUAK2Q9H093 628 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 TVP23BQ9NYZ1 205 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 UGT2A1Q9Y4X1 527 aa13.35□□□□□ -0.27
NPHP4-205ENST00000466897 SPTBN1Q01082 2364 aaKnown RBP13.35□□□□□ -0.27
NPHP4-205ENST00000466897 IGLV1-36A0A0B4J1U3 117 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 IGKV1D-43A0A0B4J1Z2 117 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 PRR23D1E9PI22 279 aaPredicted RBP13.34□□□□□ -0.27
NPHP4-205ENST00000466897 C16orf97H3BN30 126 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 SLC16A7O60669 478 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 RNF224P0DH78 156 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 PRR23D2P0DMB1 279 aaPredicted RBP13.34□□□□□ -0.27
NPHP4-205ENST00000466897 PPP3CBP16298 524 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 NPR2P20594 1047 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 PAX7P23759 505 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 CCKARP32238 428 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 HSPA13P48723 471 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 FOXG1P55316 489 aaPredicted RBP13.34□□□□□ -0.27
NPHP4-205ENST00000466897 SNCBQ16143 134 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 GABRA6Q16445 453 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 SLC25A30Q5SVS4 291 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 CCDC36Q8IYA8 594 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 OR6V1Q8N148 313 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 DEPDC4Q8N2C3 294 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 OR1K1Q8NGR3 316 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 TMEM163Q8TC26 289 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 ZNF837Q96EG3 531 aaPredicted RBP13.34□□□□□ -0.27
NPHP4-205ENST00000466897 ADI1Q9BV57 179 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 OBP2BQ9NPH6 170 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 HINT3Q9NQE9 182 aaKnown RBP13.34□□□□□ -0.27
NPHP4-205ENST00000466897 RPRD1BQ9NQG5 326 aaKnown RBP13.34□□□□□ -0.27
NPHP4-205ENST00000466897 TMEM38BQ9NVV0 291 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 B9D1Q9UPM9 204 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 GMPPBQ9Y5P6 360 aa13.34□□□□□ -0.27
NPHP4-205ENST00000466897 DCTN6O00399 190 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 PRODHO43272 600 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 PRKYO43930 277 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 MPZL2O60487 215 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 LYZL6O75951 148 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 CAPGP40121 348 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 BLVRAP53004 296 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 AQP4P55087 323 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 ARF1P84077 181 aaKnown RBP13.33□□□□□ -0.28
NPHP4-205ENST00000466897 GLO1Q04760 184 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 FAM27E3Q08E93 113 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 SLC35D3Q5M8T2 416 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 TIMM23BQ5SRD1 257 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 NXNL2Q5VZ03 156 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 BHLHA15Q7RTS1 189 aaPredicted RBP13.33□□□□□ -0.28
NPHP4-205ENST00000466897 DPPA2Q7Z7J5 298 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 GLB1L2Q8IW92 636 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 CYB561A3Q8NBI2 242 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms