RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 BAIAP2Q9UQB8 552 aa12.66□□□□□ -0.38
DNMT3A-208ENST00000466601 A6NNC1 897 aa12.65□□□□□ -0.38
DNMT3A-208ENST00000466601 BAG2O95816 211 aa12.65□□□□□ -0.38
DNMT3A-208ENST00000466601 WNT11O96014 354 aa12.65□□□□□ -0.38
DNMT3A-208ENST00000466601 B4GALT1P15291 398 aa12.65□□□□□ -0.38
DNMT3A-208ENST00000466601 POU1F1P28069 291 aa12.65□□□□□ -0.38
DNMT3A-208ENST00000466601 LEG1Q6P5S2 330 aa12.65□□□□□ -0.38
DNMT3A-208ENST00000466601 PQLC1Q8N2U9 271 aa12.65□□□□□ -0.38
DNMT3A-208ENST00000466601 LNX2Q8N448 690 aa12.65□□□□□ -0.38
DNMT3A-208ENST00000466601 OR52E2Q8NGJ4 325 aa12.65□□□□□ -0.38
DNMT3A-208ENST00000466601 OR4K13Q8NH42 304 aa12.65□□□□□ -0.38
DNMT3A-208ENST00000466601 SNX18Q96RF0 628 aa12.65□□□□□ -0.38
DNMT3A-208ENST00000466601 NMNAT3Q96T66 252 aa12.65□□□□□ -0.38
DNMT3A-208ENST00000466601 NGBQ9NPG2 151 aa12.65□□□□□ -0.38
DNMT3A-208ENST00000466601 KRT84Q9NSB2 600 aa12.65□□□□□ -0.38
DNMT3A-208ENST00000466601 TMEM38BQ9NVV0 291 aa12.65□□□□□ -0.38
DNMT3A-208ENST00000466601 PKDREJQ9NTG1 2253 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 PTPN13Q12923 2485 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 ARPC4-TTLL3A0A0A6YYG9 625 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 DEFB108AA8MXU0 73 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 SLC16A7O60669 478 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 GOSR1O95249 250 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 RENP00797 406 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 OR8G3PP0DMU2 310 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 SSTR2P30874 369 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 GIPRP48546 466 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 TUBA1BP68363 451 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 TUBA4AP68366 448 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 TLE4Q04727 773 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 GINS1Q14691 196 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 ETFDHQ16134 617 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 PGGHGQ32M88 737 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 BEX5Q5H9J7 111 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 KDM4DQ6B0I6 523 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 SEZ6L2Q6UXD5 910 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 TUBA1AQ71U36 451 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 CCDC36Q8IYA8 594 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 PARP8Q8N3A8 854 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 SLC22A24Q8N4F4 322 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 SDR9C7Q8NEX9 313 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 C1QTNF6Q9BXI9 259 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 SYT4Q9H2B2 425 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 UGT2A1Q9Y4X1 527 aa12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 UTP20O75691 2785 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-208ENST00000466601 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 FAM221AA4D161 298 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 SIAH2O43255 324 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 MITFO75030 526 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 KHDRBS3O75525 346 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 CTAG2O75638 210 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 FARS2O95363 451 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 CTLA4P16410 223 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 NPR2P20594 1047 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 PAX7P23759 505 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 CRABP1P29762 137 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 CDAP32320 146 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 GRK5P34947 590 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 GUCA1AP43080 201 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 CAPZA2P47755 286 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 CRISP1P54107 249 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 MRPS34P82930 218 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 PPP2R2BQ00005 443 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 CDK5Q00535 292 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 NRN1LQ496H8 165 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 ZNF362Q5T0B9 420 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 FBXW10Q5XX13 1052 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 ACSM5Q6NUN0 579 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 SLC27A4Q6P1M0 643 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 IQCF1Q8N6M8 205 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 NPEPL1Q8NDH3 523 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 HTRA1Q92743 480 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 PIK3IP1Q96FE7 263 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 PLPPR2Q96GM1 343 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 CIB1Q99828 191 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 RBM4BQ9BQ04 359 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 RBM4Q9BWF3 364 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 OSBPL10Q9BXB5 764 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 NUAK2Q9H093 628 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 RERGLQ9H628 205 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 SEC61A2Q9H9S3 476 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 RASSF1Q9NS23 344 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 NPAP1Q9NZP6 1156 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 KLHL21Q9UJP4 597 aa12.63□□□□□ -0.39
DNMT3A-208ENST00000466601 A0A1W2PPL8 197 aa12.62□□□□□ -0.39
DNMT3A-208ENST00000466601 OR6C68A6NDL8 312 aa12.62□□□□□ -0.39
DNMT3A-208ENST00000466601 MGRN1O60291 552 aa12.62□□□□□ -0.39
DNMT3A-208ENST00000466601 HLA-HP01893 362 aa12.62□□□□□ -0.39
DNMT3A-208ENST00000466601 HRGP04196 525 aa12.62□□□□□ -0.39
DNMT3A-208ENST00000466601 CD79AP11912 226 aa12.62□□□□□ -0.39
DNMT3A-208ENST00000466601 PRF1P14222 555 aa12.62□□□□□ -0.39
DNMT3A-208ENST00000466601 IGFBP5P24593 272 aa12.62□□□□□ -0.39
DNMT3A-208ENST00000466601 ZNF83P51522 516 aa12.62□□□□□ -0.39
DNMT3A-208ENST00000466601 NR1H2P55055 460 aa12.62□□□□□ -0.39
DNMT3A-208ENST00000466601 ESRRGP62508 458 aa12.62□□□□□ -0.39
DNMT3A-208ENST00000466601 ELF3P78545 371 aaPredicted RBP12.62□□□□□ -0.39
DNMT3A-208ENST00000466601 DAG1Q14118 895 aa12.62□□□□□ -0.39
DNMT3A-208ENST00000466601 SGCAQ16586 387 aa12.62□□□□□ -0.39
DNMT3A-208ENST00000466601 NCMAPQ5T1S8 102 aa12.62□□□□□ -0.39
DNMT3A-208ENST00000466601 DNM1P34Q6PK57 102 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms