RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 GPANK1O95872 356 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 TP53P04637 393 aaPredicted RBP10.15□□□□□ -0.78
CUX1-207ENST00000465461 CECR9P0C854 216 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 CBR1P16152 277 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 PTAFRP25105 342 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 CALCRP30988 508 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 SDHAP31040 664 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 SLC6A6P31641 620 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 GIPRP48546 466 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 PTDSS1P48651 473 aaKnown RBP10.15□□□□□ -0.78
CUX1-207ENST00000465461 ZNF84P51523 738 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 IDH3GP51553 393 aaPredicted RBP10.15□□□□□ -0.78
CUX1-207ENST00000465461 RPS6KA3P51812 740 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 ZNF133P52736 654 aaPredicted RBP10.15□□□□□ -0.78
CUX1-207ENST00000465461 RAP1BP61224 184 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 RAP1AP62834 184 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 KRR1Q13601 381 aaKnown RBP10.15□□□□□ -0.78
CUX1-207ENST00000465461 KEAP1Q14145 624 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 KPNB1Q14974 876 aaKnown RBP10.15□□□□□ -0.78
CUX1-207ENST00000465461 SGCAQ16586 387 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 SLC35F1Q5T1Q4 408 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 C10orf128Q5T292 105 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 SLC22A25Q6T423 547 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 TMEM108Q6UXF1 575 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 PAMR1Q6UXH9 720 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 B3GLCTQ6Y288 498 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 ZNF627Q7L945 461 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 HDDC2Q7Z4H3 204 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 AMIGO2Q86SJ2 522 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 OR4K13Q8NH42 304 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 SLC38A2Q96QD8 506 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 RBP7Q96R05 134 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 ALG12Q9BV10 488 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 SYT4Q9H2B2 425 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 FN3KQ9H479 309 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 DENND2DQ9H6A0 471 aaPredicted RBP10.15□□□□□ -0.78
CUX1-207ENST00000465461 OBP2BQ9NPH6 170 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 ARMC1Q9NVT9 282 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 B3GNT2Q9NY97 397 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 STX18Q9P2W9 335 aaKnown RBP10.15□□□□□ -0.78
CUX1-207ENST00000465461 DNAJB9Q9UBS3 223 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 MOKQ9UQ07 419 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 ATP23Q9Y6H3 246 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 ITPR2Q14571 2701 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 PRSS37A4D1T9 235 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 CENPBD1B2RD01 187 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 E7EQL1 145 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 HS3ST1O14792 307 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 SLC16A7O60669 478 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 MPZL1O95297 269 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 RAF1P04049 648 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 OR8G3PP0DMU2 310 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 HOXB1P14653 301 aaPredicted RBP10.14□□□□□ -0.79
CUX1-207ENST00000465461 HIST1H1CP16403 213 aaKnown RBP10.14□□□□□ -0.79
CUX1-207ENST00000465461 CTLA4P16410 223 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 CD53P19397 219 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 RAB1AP62820 205 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 RAB39AQ14964 217 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 GSG1Q2KHT4 349 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 ZNF672Q499Z4 452 aaPredicted RBP10.14□□□□□ -0.79
CUX1-207ENST00000465461 THEM4Q5T1C6 240 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 FAM205BPQ63HN1 556 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 UGT2A3Q6UWM9 527 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 RASSF6Q6ZTQ3 369 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 LINC00471Q8N535 108 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 SDR9C7Q8NEX9 313 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 OR52E2Q8NGJ4 325 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 OR4Q3Q8NH05 313 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 PYDC1Q8WXC3 89 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 LRTOMTQ8WZ04 291 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 NABP1Q96AH0 204 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 ZNF75AQ96N20 296 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 TSSK2Q96PF2 358 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 NMNAT3Q96T66 252 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 DGCR6LQ9BY27 220 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 NDEL1Q9GZM8 345 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 SEMA6AQ9H2E6 1030 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 YY1AP1Q9H869 796 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 RNF121Q9H920 327 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 CISD1Q9NZ45 108 aaKnown RBP10.14□□□□□ -0.79
CUX1-207ENST00000465461 CRNNQ9UBG3 495 aaPredicted RBP10.14□□□□□ -0.79
CUX1-207ENST00000465461 POU2F3Q9UKI9 436 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 MGAT4BQ9UQ53 548 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 AP4S1Q9Y587 144 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 CDH10Q9Y6N8 788 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 AKAP6Q13023 2319 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 HRNRQ86YZ3 2850 aaPredicted RBP10.14□□□□□ -0.79
CUX1-207ENST00000465461 APCP25054 2843 aa10.14□□□□□ -0.79
CUX1-207ENST00000465461 RAI1Q7Z5J4 1906 aaPredicted RBP10.13□□□□□ -0.79
CUX1-207ENST00000465461 CADP27708 2225 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 FAM171A2A8MVW0 826 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 DCTN6O00399 190 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 BHLHE40O14503 412 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 TXNDC12O95881 172 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 IGKV3-15P01624 115 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 IGLV1-44P01699 117 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 SOD3P08294 240 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 CCL2P13500 99 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 DNASE1P24855 282 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 LAP3P28838 519 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms