RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 FAM86B1Q8N7N1 296 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 OR4K5Q8NGD3 323 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 OR13C2Q8NGS9 318 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 FNDC8Q8TC99 324 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 SLC7A13Q8TCU3 470 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 HDAC2Q92769 488 aaKnown RBP14.06□□□□□ -0.16
COL1A1-202ENST00000463440 PYURFQ96I23 114 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 C7orf34Q96L11 122 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 ZNF75AQ96N20 296 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 TNFRSF13CQ96RJ3 184 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 SH3GL3Q99963 347 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 ALG12Q9BV10 488 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 REG4Q9BYZ8 158 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 RNF121Q9H920 327 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 SMURF2Q9HAU4 748 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 KRCC1Q9NPI7 259 aaPredicted RBP14.06□□□□□ -0.16
COL1A1-202ENST00000463440 ZNF346Q9UL40 294 aaKnown RBP14.06□□□□□ -0.16
COL1A1-202ENST00000463440 V9GYQ6 96 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 A6NIZ1 184 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 RNF223E7ERA6 249 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 ARPC2O15144 300 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 SERPINA5P05154 406 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 PATE4P0C8F1 98 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 NPR2P20594 1047 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 NR4A1P22736 598 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 THBS4P35443 961 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 RPL4P36578 427 aaKnown RBP14.05□□□□□ -0.16
COL1A1-202ENST00000463440 GPR4P46093 362 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 EFNA4P52798 201 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 SMIM11AP58511 58 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 RAP1BP61224 184 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 RAP1AP62834 184 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 VLDLRP98155 873 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 GALK2Q01415 458 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 SNTB2Q13425 540 aaKnown RBP14.05□□□□□ -0.16
COL1A1-202ENST00000463440 RAB39AQ14964 217 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 ZBED5Q49AG3 693 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 KRT80Q6KB66 452 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 Q71RC1 249 aaPredicted RBP14.05□□□□□ -0.16
COL1A1-202ENST00000463440 IGFN1Q86VF2 1251 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 FITM2Q8N6M3 262 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 LRRC75AQ8NAA5 344 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 CCDC197Q8NCU1 140 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 FGFBP3Q8TAT2 258 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 HTRA1Q92743 480 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 MCUR1Q96AQ8 359 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 NSL1Q96IY1 281 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 RBP7Q96R05 134 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 KCNK17Q96T54 332 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 KCNN2Q9H2S1 579 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 FKBP7Q9Y680 259 aa14.05□□□□□ -0.16
COL1A1-202ENST00000463440 CDC42EP2O14613 210 aa14.04□□□□□ -0.16
COL1A1-202ENST00000463440 DIRAS1O95057 198 aa14.04□□□□□ -0.16
COL1A1-202ENST00000463440 SLC2A10O95528 541 aa14.04□□□□□ -0.16
COL1A1-202ENST00000463440 ZNF35P13682 527 aa14.04□□□□□ -0.16
COL1A1-202ENST00000463440 MSX2P35548 267 aaPredicted RBP14.04□□□□□ -0.16
COL1A1-202ENST00000463440 MRPS34P82930 218 aaKnown RBP14.04□□□□□ -0.16
COL1A1-202ENST00000463440 FHL1Q13642 323 aa14.04□□□□□ -0.16
COL1A1-202ENST00000463440 THEM4Q5T1C6 240 aa14.04□□□□□ -0.16
COL1A1-202ENST00000463440 FAM46AQ96IP4 442 aaKnown RBP14.04□□□□□ -0.16
COL1A1-202ENST00000463440 C1orf198Q9H425 327 aa14.04□□□□□ -0.16
COL1A1-202ENST00000463440 PLK3Q9H4B4 646 aa14.04□□□□□ -0.16
COL1A1-202ENST00000463440 SIAEQ9HAT2 523 aa14.04□□□□□ -0.16
COL1A1-202ENST00000463440 CMAHPQ9Y471 501 aa14.04□□□□□ -0.16
COL1A1-202ENST00000463440 ARFGEF3Q5TH69 2177 aa14.03□□□□□ -0.16
COL1A1-202ENST00000463440 B2RBV5 119 aa14.03□□□□□ -0.16
COL1A1-202ENST00000463440 F12P00748 615 aaPredicted RBP14.03□□□□□ -0.16
COL1A1-202ENST00000463440 PTHP01270 115 aa14.03□□□□□ -0.16
COL1A1-202ENST00000463440 SEMG1P04279 462 aa14.03□□□□□ -0.16
COL1A1-202ENST00000463440 CSF3P09919 207 aa14.03□□□□□ -0.16
COL1A1-202ENST00000463440 GUCA1AP43080 201 aaPredicted RBP14.03□□□□□ -0.16
COL1A1-202ENST00000463440 RPS23P62266 143 aaKnown RBP14.03□□□□□ -0.16
COL1A1-202ENST00000463440 PLP2Q04941 152 aa14.03□□□□□ -0.16
COL1A1-202ENST00000463440 FMODQ06828 376 aa14.03□□□□□ -0.16
COL1A1-202ENST00000463440 SLC25A47Q6Q0C1 308 aa14.03□□□□□ -0.16
COL1A1-202ENST00000463440 LRRC18Q8N456 261 aa14.03□□□□□ -0.16
COL1A1-202ENST00000463440 ARIH2OSQ8N7S6 290 aa14.03□□□□□ -0.16
COL1A1-202ENST00000463440 OR52J3Q8NH60 311 aa14.03□□□□□ -0.16
COL1A1-202ENST00000463440 ZNF519Q8TB69 540 aa14.03□□□□□ -0.16
COL1A1-202ENST00000463440 NSMAFQ92636 917 aa14.03□□□□□ -0.16
COL1A1-202ENST00000463440 NMD3Q96D46 503 aaKnown RBP14.03□□□□□ -0.16
COL1A1-202ENST00000463440 DHRS1Q96LJ7 313 aa14.03□□□□□ -0.16
COL1A1-202ENST00000463440 TSPAN32Q96QS1 320 aa14.03□□□□□ -0.16
COL1A1-202ENST00000463440 VRK1Q99986 396 aaPredicted RBP14.03□□□□□ -0.16
COL1A1-202ENST00000463440 GRHPRQ9UBQ7 328 aa14.03□□□□□ -0.16
COL1A1-202ENST00000463440 AURKCQ9UQB9 309 aa14.03□□□□□ -0.16
COL1A1-202ENST00000463440 TRBV4-1A0A0J9YWV2 114 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 IQCMA0A1B0GVH7 501 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 GADD45GO95257 159 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 FABP3P05413 133 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 ERCC1P07992 297 aaPredicted RBP14.02□□□□□ -0.17
COL1A1-202ENST00000463440 CD14P08571 375 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 CDAP32320 146 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 GLRXP35754 106 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 PPOXP50336 477 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 ERVK-25P63136 954 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 SPIBQ01892 262 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 SGCAQ16586 387 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 ZNF584Q8IVC4 421 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 ARHGAP24Q8N264 748 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms