RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 KRT80Q6KB66 452 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 VWA1Q6PCB0 445 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 TFAP2EQ6VUC0 442 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.66□□□□□ -0.38
COL6A1-202ENST00000463060 GID4Q8IVV7 300 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 POMGNT2Q8NAT1 580 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 OR6N1Q8NGY5 312 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 OR2T4Q8NH00 348 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 APH1AQ96BI3 265 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 YTHDF1Q9BYJ9 559 aaKnown RBP12.66□□□□□ -0.38
COL6A1-202ENST00000463060 OR51V1Q9H2C8 321 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 FKBP14Q9NWM8 211 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 Q9UFV3 132 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 WARS2Q9UGM6 360 aaKnown RBP12.66□□□□□ -0.38
COL6A1-202ENST00000463060 INTS1Q8N201 2190 aaKnown RBP12.66□□□□□ -0.38
COL6A1-202ENST00000463060 NBASA2RRP1 2371 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 TRGV8A0A0C4DH27 118 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 M0R3G1 203 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 SLC1A7O00341 560 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 DHHO43323 396 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 XPNPEP2O43895 674 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 KHDRBS3O75525 346 aaKnown RBP12.65□□□□□ -0.38
COL6A1-202ENST00000463060 CNOT4O95628 575 aaKnown RBP12.65□□□□□ -0.38
COL6A1-202ENST00000463060 CD8BP10966 210 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 CRHBPP24387 322 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 GSTT1P30711 240 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 PYCR1P32322 319 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 NUDT6P53370 316 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 CDH11P55287 796 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 GGTLC2Q14390 218 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 IGFBP7Q16270 282 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 RBM48Q5RL73 367 aaKnown RBP12.65□□□□□ -0.38
COL6A1-202ENST00000463060 TMEM211Q6ICI0 200 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 B3GLCTQ6Y288 498 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 NCCRP1Q6ZVX7 275 aaPredicted RBP12.65□□□□□ -0.38
COL6A1-202ENST00000463060 OR51L1Q8NGJ5 315 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 RFKQ969G6 155 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 OTULINQ96BN8 352 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 DUSP21Q9H596 190 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 GPR35Q9HC97 309 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 AMBNQ9NP70 447 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 H2AFY2Q9P0M6 372 aaPredicted RBP12.65□□□□□ -0.38
COL6A1-202ENST00000463060 MALT1Q9UDY8 824 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 PRSS50Q9UI38 385 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 PSORS1C1Q9UIG5 152 aa12.65□□□□□ -0.38
COL6A1-202ENST00000463060 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.65□□□□□ -0.38
COL6A1-202ENST00000463060 EXOGQ9Y2C4 368 aaKnown RBP12.65□□□□□ -0.38
COL6A1-202ENST00000463060 COA3Q9Y2R0 106 aaPredicted RBP12.65□□□□□ -0.38
COL6A1-202ENST00000463060 SLC22A31A6NKX4 558 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 HSPB2A8KAH6 182 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 FAM171A2A8MVW0 826 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 J3QRE1 110 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 TFP02787 698 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 SCG5P05408 212 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 GAAP10253 952 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 DBTP11182 482 aaKnown RBP12.64□□□□□ -0.39
COL6A1-202ENST00000463060 NR2C1P13056 603 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 CENPAP49450 140 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 CASP6P55212 293 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 FOXG1P55316 489 aaPredicted RBP12.64□□□□□ -0.39
COL6A1-202ENST00000463060 PER3P56645 1201 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 SIRPAP78324 504 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 ZNF91Q05481 1191 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 HSPB2Q16082 182 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 KCNMB1Q16558 191 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 FBXW9Q5XUX1 488 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 DNM1P34Q6PK57 102 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 ZNF627Q7L945 461 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 TIGD4Q8IY51 512 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 ZNF100Q8IYN0 542 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 ZNF786Q8N393 782 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 GPR137CQ8N3F9 429 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 BPIFB6Q8NFQ5 453 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 SLC26A10Q8NG04 563 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 GGHQ92820 318 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 NR1H4Q96RI1 486 aaPredicted RBP12.64□□□□□ -0.39
COL6A1-202ENST00000463060 SIGLEC11Q96RL6 698 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 RHNO1Q9BSD3 238 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 SFXN3Q9BWM7 321 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 ULBP2Q9BZM5 246 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 C12orf49Q9H741 205 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 PAK1IP1Q9NWT1 392 aaPredicted RBP12.64□□□□□ -0.39
COL6A1-202ENST00000463060 MRPL22Q9NWU5 206 aaKnown RBP12.64□□□□□ -0.39
COL6A1-202ENST00000463060 ZNF629Q9UEG4 869 aaPredicted RBP12.64□□□□□ -0.39
COL6A1-202ENST00000463060 SH3BGRL2Q9UJC5 107 aa12.64□□□□□ -0.39
COL6A1-202ENST00000463060 RPL36Q9Y3U8 105 aaKnown RBP12.64□□□□□ -0.39
COL6A1-202ENST00000463060 GPANK1O95872 356 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 IGHV3-9P01782 118 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 HRGP04196 525 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 ADRA2AP08913 450 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 LAP3P28838 519 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 MTNR1AP48039 350 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 CHN2P52757 468 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 SLC35A2P78381 396 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 MRPS34P82930 218 aaKnown RBP12.63□□□□□ -0.39
COL6A1-202ENST00000463060 ROR2Q01974 943 aaKnown RBP12.63□□□□□ -0.39
COL6A1-202ENST00000463060 HSF2Q03933 536 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 PCK2Q16822 640 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 KLHL12Q53G59 568 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 LYPD4Q6UWN0 246 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms