RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 ZNF43P17038 809 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 ELK1P19419 428 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 RRM2P31350 389 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 RORAP35398 523 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 ATP5C1P36542 298 aaKnown RBP2.62□□□□□ -1.99
CLK1-206ENST00000461326 GPR6P46095 362 aaPredicted RBP2.62□□□□□ -1.99
CLK1-206ENST00000461326 NPBWR2P48146 333 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 SUB1P53999 127 aaKnown RBP eCLIP2.62□□□□□ -1.99
CLK1-206ENST00000461326 GNB2P62879 340 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 PSG7Q13046 419 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 KIAA0087Q14695 138 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 RCN1Q15293 331 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 LRRC10Q5BKY1 277 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 COA6Q5JTJ3 125 aaKnown RBP2.62□□□□□ -1.99
CLK1-206ENST00000461326 SPANXN2Q5MJ10 180 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 CTRB2Q6GPI1 263 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 CAMK2N1Q7Z7J9 78 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 MFSD6LQ8IWD5 586 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 TTC5Q8N0Z6 440 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 B3GNT7Q8NFL0 401 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 OR52K2Q8NGK3 314 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 OR2G2Q8NGZ5 317 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 OR6X1Q8NH79 312 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 FAM110BQ8TC76 370 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 BLOC1S5Q8TDH9 187 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 ELSPBP1Q96BH3 223 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 MS4A4EQ96PG1 132 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 CHP1Q99653 195 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 NRTNQ99748 197 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 SH3GL3Q99963 347 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 RASL11BQ9BPW5 248 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 CENPKQ9BS16 269 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 TMEM59Q9BXS4 323 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 FAM192AQ9GZU8 254 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 ANAPC11Q9NYG5 84 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 XCL2Q9UBD3 114 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 CLCF1Q9UBD9 225 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 CSDC2Q9Y534 153 aaKnown RBP2.62□□□□□ -1.99
CLK1-206ENST00000461326 MYOM2P54296 1465 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 ASXL1Q8IXJ9 1541 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 PHLPP1O60346 1717 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 NRXN1Q9ULB1 1477 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 TRBV11-1A0A0K0K1C0 115 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 GJE1A6NN92 205 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 USP27XA6NNY8 438 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 RNF13O43567 381 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 GKN3PP0CG01 181 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 TDGF1P13385 188 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 CRISP2P16562 243 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 ZNF19P17023 458 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 CCNCP24863 283 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 SLC26A3P40879 764 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 CSNK1DP48730 415 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 SSR4P51571 173 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 TDGF1P3P51864 188 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 CDH6P55285 790 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 CCNA1P78396 465 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 NDPQ00604 133 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 ENPEPQ07075 957 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 DAZ2Q13117 558 aaKnown RBP2.61□□□□□ -1.99
CLK1-206ENST00000461326 HSP90AB3PQ58FF7 597 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 PRAMEF20Q5VT98 475 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 LRRC66Q68CR7 880 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 COX15Q7KZN9 410 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 FAM71E2Q8N5Q1 922 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 DCAF4L2Q8NA75 395 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 SUMF2Q8NBJ7 301 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 PLPPR1Q8TBJ4 325 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 ELMO1Q92556 727 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 CYYR1Q96J86 154 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 FAM210BQ96KR6 192 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 ZIM3Q96PE6 472 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 TGS1Q96RS0 853 aaKnown RBP2.61□□□□□ -1.99
CLK1-206ENST00000461326 HES7Q9BYE0 225 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 EML4Q9HC35 981 aaKnown RBP2.61□□□□□ -1.99
CLK1-206ENST00000461326 NEK6Q9HC98 313 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 DAZ3Q9NR90 486 aaKnown RBP2.61□□□□□ -1.99
CLK1-206ENST00000461326 CCL28Q9NRJ3 127 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 ZNF225Q9UK10 706 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 ARHGEF28Q8N1W1 1705 aaKnown RBP2.61□□□□□ -1.99
CLK1-206ENST00000461326 RGPD8O14715 1765 aaPredicted RBP2.61□□□□□ -1.99
CLK1-206ENST00000461326 ATRXP46100 2492 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 ZNF318Q5VUA4 2279 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 NSD2O96028 1365 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 TONSLQ96HA7 1378 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 USP47Q96K76 1375 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 PIK3R4Q99570 1358 aa2.61□□□□□ -1.99
CLK1-206ENST00000461326 TRPM1Q7Z4N2 1603 aa2.6□□□□□ -1.99
CLK1-206ENST00000461326 YTHDC2Q9H6S0 1430 aaKnown RBP2.6□□□□□ -1.99
CLK1-206ENST00000461326 IGLV3-22A0A075B6J6 115 aa2.6□□□□□ -1.99
CLK1-206ENST00000461326 H0Y9J4 135 aa2.6□□□□□ -1.99
CLK1-206ENST00000461326 H3BNH8 94 aa2.6□□□□□ -1.99
CLK1-206ENST00000461326 CDC7O00311 574 aa2.6□□□□□ -1.99
CLK1-206ENST00000461326 RTL8CO15255 209 aa2.6□□□□□ -1.99
CLK1-206ENST00000461326 EIF3GO75821 320 aaKnown RBP eCLIP2.6□□□□□ -1.99
CLK1-206ENST00000461326 INSP01308 110 aa2.6□□□□□ -1.99
CLK1-206ENST00000461326 DNAH10OSP0CZ25 163 aa2.6□□□□□ -1.99
CLK1-206ENST00000461326 TOP1P11387 765 aaKnown RBP2.6□□□□□ -1.99
CLK1-206ENST00000461326 ZNF24P17028 368 aa2.6□□□□□ -1.99
CLK1-206ENST00000461326 GPX6P59796 221 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms