RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 ACVR1BP36896 505 aa19.49■□□□□ 0.71
TRAF4-207ENST00000461195 SERPINF1P36955 418 aa19.49■□□□□ 0.71
TRAF4-207ENST00000461195 SMIM11AP58511 58 aa19.49■□□□□ 0.71
TRAF4-207ENST00000461195 CD47Q08722 323 aa19.49■□□□□ 0.71
TRAF4-207ENST00000461195 RAB35Q15286 201 aa19.49■□□□□ 0.71
TRAF4-207ENST00000461195 ZBED5Q49AG3 693 aa19.49■□□□□ 0.71
TRAF4-207ENST00000461195 IQCCQ4KMZ1 466 aa19.49■□□□□ 0.71
TRAF4-207ENST00000461195 VHLLQ6RSH7 139 aa19.49■□□□□ 0.71
TRAF4-207ENST00000461195 DPPA2Q7Z7J5 298 aa19.49■□□□□ 0.71
TRAF4-207ENST00000461195 ARHGAP24Q8N264 748 aa19.49■□□□□ 0.71
TRAF4-207ENST00000461195 OR4K5Q8NGD3 323 aa19.49■□□□□ 0.71
TRAF4-207ENST00000461195 MS4A3Q96HJ5 214 aa19.49■□□□□ 0.71
TRAF4-207ENST00000461195 FAM46AQ96IP4 442 aaKnown RBP19.49■□□□□ 0.71
TRAF4-207ENST00000461195 KCNK17Q96T54 332 aa19.49■□□□□ 0.71
TRAF4-207ENST00000461195 SH3GL3Q99963 347 aa19.49■□□□□ 0.71
TRAF4-207ENST00000461195 ALG12Q9BV10 488 aa19.49■□□□□ 0.71
TRAF4-207ENST00000461195 NDEL1Q9GZM8 345 aa19.49■□□□□ 0.71
TRAF4-207ENST00000461195 SMURF2Q9HAU4 748 aa19.49■□□□□ 0.71
TRAF4-207ENST00000461195 KRCC1Q9NPI7 259 aaPredicted RBP19.49■□□□□ 0.71
TRAF4-207ENST00000461195 TRBV4-1A0A0J9YWV2 114 aa19.48■□□□□ 0.71
TRAF4-207ENST00000461195 A6NIZ1 184 aa19.48■□□□□ 0.71
TRAF4-207ENST00000461195 VSTM5A8MXK1 200 aa19.48■□□□□ 0.71
TRAF4-207ENST00000461195 SLC2A10O95528 541 aa19.48■□□□□ 0.71
TRAF4-207ENST00000461195 PATE4P0C8F1 98 aa19.48■□□□□ 0.71
TRAF4-207ENST00000461195 RAP1BP61224 184 aa19.48■□□□□ 0.71
TRAF4-207ENST00000461195 RAP1AP62834 184 aa19.48■□□□□ 0.71
TRAF4-207ENST00000461195 TNK1Q13470 666 aa19.48■□□□□ 0.71
TRAF4-207ENST00000461195 ADIPOQQ15848 244 aa19.48■□□□□ 0.71
TRAF4-207ENST00000461195 SWI5Q1ZZU3 235 aa19.48■□□□□ 0.71
TRAF4-207ENST00000461195 MST1LQ2TV78 715 aa19.48■□□□□ 0.71
TRAF4-207ENST00000461195 OR52J3Q8NH60 311 aa19.48■□□□□ 0.71
TRAF4-207ENST00000461195 FGFBP3Q8TAT2 258 aa19.48■□□□□ 0.71
TRAF4-207ENST00000461195 FNDC8Q8TC99 324 aa19.48■□□□□ 0.71
TRAF4-207ENST00000461195 HTRA1Q92743 480 aa19.48■□□□□ 0.71
TRAF4-207ENST00000461195 NMD3Q96D46 503 aaKnown RBP19.48■□□□□ 0.71
TRAF4-207ENST00000461195 TSPAN32Q96QS1 320 aa19.48■□□□□ 0.71
TRAF4-207ENST00000461195 RBP7Q96R05 134 aa19.48■□□□□ 0.71
TRAF4-207ENST00000461195 SMR3AQ99954 134 aa19.48■□□□□ 0.71
TRAF4-207ENST00000461195 ZNF442Q9H7R0 627 aa19.48■□□□□ 0.71
TRAF4-207ENST00000461195 FAM171A2A8MVW0 826 aa19.47■□□□□ 0.71
TRAF4-207ENST00000461195 SMAD7O15105 426 aaKnown RBP19.47■□□□□ 0.71
TRAF4-207ENST00000461195 SSX4O60224 188 aa19.47■□□□□ 0.71
TRAF4-207ENST00000461195 MGRN1O60291 552 aa19.47■□□□□ 0.71
TRAF4-207ENST00000461195 FABP3P05413 133 aa19.47■□□□□ 0.71
TRAF4-207ENST00000461195 OR4A8P0C604 315 aa19.47■□□□□ 0.71
TRAF4-207ENST00000461195 RPL4P36578 427 aaKnown RBP19.47■□□□□ 0.71
TRAF4-207ENST00000461195 OMPP47874 163 aa19.47■□□□□ 0.71
TRAF4-207ENST00000461195 NUDT6P53370 316 aa19.47■□□□□ 0.71
TRAF4-207ENST00000461195 SNRPD2P62316 118 aaKnown RBP19.47■□□□□ 0.71
TRAF4-207ENST00000461195 SPIBQ01892 262 aa19.47■□□□□ 0.71
TRAF4-207ENST00000461195 DAG1Q14118 895 aa19.47■□□□□ 0.71
TRAF4-207ENST00000461195 RAB39AQ14964 217 aa19.47■□□□□ 0.71
TRAF4-207ENST00000461195 SEC23BQ15437 767 aa19.47■□□□□ 0.71
TRAF4-207ENST00000461195 SLC36A2Q495M3 483 aa19.47■□□□□ 0.71
TRAF4-207ENST00000461195 THEM4Q5T1C6 240 aa19.47■□□□□ 0.71
TRAF4-207ENST00000461195 TMEM53Q6P2H8 277 aa19.47■□□□□ 0.71
TRAF4-207ENST00000461195 SLC16A14Q7RTX9 510 aa19.47■□□□□ 0.71
TRAF4-207ENST00000461195 ZNF519Q8TB69 540 aa19.47■□□□□ 0.71
TRAF4-207ENST00000461195 FUZQ9BT04 418 aa19.47■□□□□ 0.71
TRAF4-207ENST00000461195 ACTR3BQ9P1U1 418 aa19.47■□□□□ 0.71
TRAF4-207ENST00000461195 ARFGEF3Q5TH69 2177 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 B9A039 149 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 GADD45GO95257 159 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 SERPINA5P05154 406 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 CD14P08571 375 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 T-ENOLP0DO92 83 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 ZNF35P13682 527 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 NPR2P20594 1047 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 THBS4P35443 961 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 LIMS1P48059 325 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 ERVK-25P63136 954 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 MRPS34P82930 218 aaKnown RBP19.46■□□□□ 0.71
TRAF4-207ENST00000461195 FMODQ06828 376 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 SNTB2Q13425 540 aaKnown RBP19.46■□□□□ 0.71
TRAF4-207ENST00000461195 EFNB3Q15768 340 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 KRT80Q6KB66 452 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 SLC25A47Q6Q0C1 308 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 RINLQ6ZS11 566 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 ARIH2OSQ8N7S6 290 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 RNF121Q9H920 327 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 SIAEQ9HAT2 523 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 IL1RAPQ9NPH3 570 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 GRHPRQ9UBQ7 328 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 AURKCQ9UQB9 309 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 SPEF1Q9Y4P9 236 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 UGT2A1Q9Y4X1 527 aa19.46■□□□□ 0.71
TRAF4-207ENST00000461195 IGKV1D-43A0A0B4J1Z2 117 aa19.45■□□□□ 0.7
TRAF4-207ENST00000461195 SH3PXD2BA1X283 911 aa19.45■□□□□ 0.7
TRAF4-207ENST00000461195 ZNF26P17031 533 aaPredicted RBP19.45■□□□□ 0.7
TRAF4-207ENST00000461195 NR4A1P22736 598 aa19.45■□□□□ 0.7
TRAF4-207ENST00000461195 MTX3Q5HYI7 312 aa19.45■□□□□ 0.7
TRAF4-207ENST00000461195 CLEC9AQ6UXN8 241 aa19.45■□□□□ 0.7
TRAF4-207ENST00000461195 CYP2R1Q6VVX0 501 aa19.45■□□□□ 0.7
TRAF4-207ENST00000461195 DNM1P46Q6ZS02 220 aa19.45■□□□□ 0.7
TRAF4-207ENST00000461195 ZNF584Q8IVC4 421 aa19.45■□□□□ 0.7
TRAF4-207ENST00000461195 ZDHHC21Q8IVQ6 265 aa19.45■□□□□ 0.7
TRAF4-207ENST00000461195 LRRC18Q8N456 261 aa19.45■□□□□ 0.7
TRAF4-207ENST00000461195 NSMAFQ92636 917 aa19.45■□□□□ 0.7
TRAF4-207ENST00000461195 KCNN2Q9H2S1 579 aa19.45■□□□□ 0.7
TRAF4-207ENST00000461195 MUC13Q9H3R2 512 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms