RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 SMURF2Q9HAU4 748 aa12.25□□□□□ -0.45
HDLBP-229ENST00000460826 OAZ3Q9UMX2 235 aa12.25□□□□□ -0.45
HDLBP-229ENST00000460826 UGT2A1Q9Y4X1 527 aa12.25□□□□□ -0.45
HDLBP-229ENST00000460826 FAM221AA4D161 298 aa12.24□□□□□ -0.45
HDLBP-229ENST00000460826 PRSS37A4D1T9 235 aa12.24□□□□□ -0.45
HDLBP-229ENST00000460826 G3V2T6 193 aa12.24□□□□□ -0.45
HDLBP-229ENST00000460826 XKRYO14609 159 aa12.24□□□□□ -0.45
HDLBP-229ENST00000460826 CASKO14936 926 aa12.24□□□□□ -0.45
HDLBP-229ENST00000460826 MITFO75030 526 aaPredicted RBP12.24□□□□□ -0.45
HDLBP-229ENST00000460826 HIST1H1CP16403 213 aaKnown RBP12.24□□□□□ -0.45
HDLBP-229ENST00000460826 ETFDHQ16134 617 aa12.24□□□□□ -0.45
HDLBP-229ENST00000460826 SLC35F1Q5T1Q4 408 aa12.24□□□□□ -0.45
HDLBP-229ENST00000460826 ZNF627Q7L945 461 aa12.24□□□□□ -0.45
HDLBP-229ENST00000460826 P2RY8Q86VZ1 359 aa12.24□□□□□ -0.45
HDLBP-229ENST00000460826 IQCF1Q8N6M8 205 aa12.24□□□□□ -0.45
HDLBP-229ENST00000460826 OR4K13Q8NH42 304 aa12.24□□□□□ -0.45
HDLBP-229ENST00000460826 NSMAFQ92636 917 aa12.24□□□□□ -0.45
HDLBP-229ENST00000460826 MUCL1Q96DR8 90 aa12.24□□□□□ -0.45
HDLBP-229ENST00000460826 C14orf79Q96F83 325 aa12.24□□□□□ -0.45
HDLBP-229ENST00000460826 RBP7Q96R05 134 aa12.24□□□□□ -0.45
HDLBP-229ENST00000460826 USB1Q9BQ65 265 aaKnown RBP12.24□□□□□ -0.45
HDLBP-229ENST00000460826 TMEM38BQ9NVV0 291 aa12.24□□□□□ -0.45
HDLBP-229ENST00000460826 ZNF226Q9NYT6 803 aa12.24□□□□□ -0.45
HDLBP-229ENST00000460826 VSX1Q9NZR4 365 aaPredicted RBP12.24□□□□□ -0.45
HDLBP-229ENST00000460826 KIF17Q9P2E2 1029 aa12.24□□□□□ -0.45
HDLBP-229ENST00000460826 ANKRD17O75179 2603 aaKnown RBP12.23□□□□□ -0.45
HDLBP-229ENST00000460826 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.23□□□□□ -0.45
HDLBP-229ENST00000460826 A0A1W2PPR1 153 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 H3BN98 237 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 CTAG2O75638 210 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 HRGP04196 525 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 OSMP13725 252 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 CTLA4P16410 223 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 POU1F1P28069 291 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 CDAP32320 146 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 ZNF83P51522 516 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 KRTAP10-9P60411 292 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 THEM4Q5T1C6 240 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 LEG1Q6P5S2 330 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 ADCK1Q86TW2 530 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 ZDHHC13Q8IUH4 622 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 C10orf67Q8IYJ2 551 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 SVOPLQ8N434 492 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 LNX2Q8N448 690 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 SDR9C7Q8NEX9 313 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 FGFBP3Q8TAT2 258 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 PIK3IP1Q96FE7 263 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 FOXN4Q96NZ1 517 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 TSSK2Q96PF2 358 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 HS3ST6Q96QI5 342 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 NMNAT3Q96T66 252 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 SYT4Q9H2B2 425 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 FN3KQ9H479 309 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 ZNF556Q9HAH1 456 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 NOX3Q9HBY0 568 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 ZNF224Q9NZL3 707 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 AMDHD2Q9Y303 409 aa12.23□□□□□ -0.45
HDLBP-229ENST00000460826 ARPC4-TTLL3A0A0A6YYG9 625 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 OR6C68A6NDL8 312 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 DPRXA6NFQ7 191 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 CYSRT1A8MQ03 144 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 DCTN6O00399 190 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 IDH3BO43837 385 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 HLA-HP01893 362 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 SCG5P05408 212 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 NOS3P29474 1203 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 SSTR2P30874 369 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 HOXC12P31275 282 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 ZNF84P51523 738 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.22□□□□□ -0.45
HDLBP-229ENST00000460826 PGGHGQ32M88 737 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 BEX5Q5H9J7 111 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 ZNF362Q5T0B9 420 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-229ENST00000460826 KDM4DQ6B0I6 523 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 ACSM5Q6NUN0 579 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 JAZF1Q86VZ6 243 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 SKA3Q8IX90 412 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 SLC22A24Q8N4F4 322 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 OR2T33Q8NG76 320 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 OR52E2Q8NGJ4 325 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 TEX47Q8TBZ9 253 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 FNDC8Q8TC99 324 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 NABP1Q96AH0 204 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 PLPPR2Q96GM1 343 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 DDOQ99489 341 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 SH3GL3Q99963 347 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 NUAK2Q9H093 628 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 PAPOLBQ9NRJ5 636 aaKnown RBP12.22□□□□□ -0.45
HDLBP-229ENST00000460826 RASSF1Q9NS23 344 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 B3GNT2Q9NY97 397 aa12.22□□□□□ -0.45
HDLBP-229ENST00000460826 TMEFF2Q9UIK5 374 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-229ENST00000460826 RAI1Q7Z5J4 1906 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-229ENST00000460826 AHCYL1O43865 530 aa12.21□□□□□ -0.45
HDLBP-229ENST00000460826 SLC16A7O60669 478 aa12.21□□□□□ -0.45
HDLBP-229ENST00000460826 WNT11O96014 354 aa12.21□□□□□ -0.45
HDLBP-229ENST00000460826 PLAUP00749 431 aa12.21□□□□□ -0.45
HDLBP-229ENST00000460826 PATE4P0C8F1 98 aa12.21□□□□□ -0.45
HDLBP-229ENST00000460826 NR2C1P13056 603 aa12.21□□□□□ -0.45
HDLBP-229ENST00000460826 HOXB1P14653 301 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-229ENST00000460826 CAPZA2P47755 286 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms