RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 PAX1P15863 534 aa14.06□□□□□ -0.16
CD28-203ENST00000458610 APOBEC3AP31941 199 aaPredicted RBP14.06□□□□□ -0.16
CD28-203ENST00000458610 TTKP33981 857 aa14.06□□□□□ -0.16
CD28-203ENST00000458610 IDH3GP51553 393 aaPredicted RBP14.06□□□□□ -0.16
CD28-203ENST00000458610 MRPS34P82930 218 aaKnown RBP14.06□□□□□ -0.16
CD28-203ENST00000458610 MYBPC1Q00872 1141 aa14.06□□□□□ -0.16
CD28-203ENST00000458610 NPRL3Q12980 569 aa14.06□□□□□ -0.16
CD28-203ENST00000458610 FLOT2Q14254 428 aa14.06□□□□□ -0.16
CD28-203ENST00000458610 RPL13AP3Q6NVV1 102 aa14.06□□□□□ -0.16
CD28-203ENST00000458610 C1orf94Q6P1W5 598 aa14.06□□□□□ -0.16
CD28-203ENST00000458610 ZER1Q7Z7L7 766 aa14.06□□□□□ -0.16
CD28-203ENST00000458610 MDP1Q86V88 176 aa14.06□□□□□ -0.16
CD28-203ENST00000458610 SKA3Q8IX90 412 aa14.06□□□□□ -0.16
CD28-203ENST00000458610 ZNF570Q96NI8 536 aa14.06□□□□□ -0.16
CD28-203ENST00000458610 TSPAN32Q96QS1 320 aa14.06□□□□□ -0.16
CD28-203ENST00000458610 GPX7Q96SL4 187 aaPredicted RBP14.06□□□□□ -0.16
CD28-203ENST00000458610 GSX2Q9BZM3 304 aa14.06□□□□□ -0.16
CD28-203ENST00000458610 RNF121Q9H920 327 aa14.06□□□□□ -0.16
CD28-203ENST00000458610 PDZD2O15018 2839 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 PRR14LQ5THK1 2151 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 ALPK2Q86TB3 2170 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 ATP6V1G2-DDX39BF2Z307 99 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 CCNB2O95067 398 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 APEHP13798 732 aaKnown RBP14.05□□□□□ -0.16
CD28-203ENST00000458610 SDHAP31040 664 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 SLC6A6P31641 620 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 PTDSS1P48651 473 aaKnown RBP14.05□□□□□ -0.16
CD28-203ENST00000458610 PLP2Q04941 152 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 PIGFQ07326 219 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 TSPAN31Q12999 210 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 PGGHGQ32M88 737 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 RFX4Q33E94 735 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 SLC25A47Q6Q0C1 308 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 PRSS57Q6UWY2 283 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 SLC16A14Q7RTX9 510 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 DTX2Q86UW9 622 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 MUC15Q8N387 334 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 ZNF519Q8TB69 540 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 IGFBPL1Q8WX77 278 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 CHID1Q9BWS9 393 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 C1orf198Q9H425 327 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 NRIP3Q9NQ35 241 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 CBLN4Q9NTU7 201 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 ZNF701Q9NV72 531 aaPredicted RBP14.05□□□□□ -0.16
CD28-203ENST00000458610 FBXO9Q9UK97 447 aaPredicted RBP14.05□□□□□ -0.16
CD28-203ENST00000458610 LYVE1Q9Y5Y7 322 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 CCDC168Q8NDH2 2452 aa14.05□□□□□ -0.16
CD28-203ENST00000458610 DHRS12A0PJE2 317 aa14.04□□□□□ -0.16
CD28-203ENST00000458610 GNGT2O14610 69 aa14.04□□□□□ -0.16
CD28-203ENST00000458610 IMPA2O14732 288 aa14.04□□□□□ -0.16
CD28-203ENST00000458610 IDH3BO43837 385 aa14.04□□□□□ -0.16
CD28-203ENST00000458610 SOD3P08294 240 aa14.04□□□□□ -0.16
CD28-203ENST00000458610 GIPRP48546 466 aa14.04□□□□□ -0.16
CD28-203ENST00000458610 GSSP48637 474 aa14.04□□□□□ -0.16
CD28-203ENST00000458610 SPOCK1Q08629 439 aa14.04□□□□□ -0.16
CD28-203ENST00000458610 ADCK1Q86TW2 530 aa14.04□□□□□ -0.16
CD28-203ENST00000458610 SPATA24Q86W54 205 aa14.04□□□□□ -0.16
CD28-203ENST00000458610 OR1J2Q8NGS2 313 aa14.04□□□□□ -0.16
CD28-203ENST00000458610 FANK1Q8TC84 345 aa14.04□□□□□ -0.16
CD28-203ENST00000458610 NSMAFQ92636 917 aa14.04□□□□□ -0.16
CD28-203ENST00000458610 NMD3Q96D46 503 aaKnown RBP14.04□□□□□ -0.16
CD28-203ENST00000458610 Q96M85 177 aa14.04□□□□□ -0.16
CD28-203ENST00000458610 WACQ9BTA9 647 aa14.04□□□□□ -0.16
CD28-203ENST00000458610 TRAF4Q9BUZ4 470 aaPredicted RBP14.04□□□□□ -0.16
CD28-203ENST00000458610 LRMDAQ9H2I8 198 aa14.04□□□□□ -0.16
CD28-203ENST00000458610 CCNB1IP1Q9NPC3 277 aa14.04□□□□□ -0.16
CD28-203ENST00000458610 POMPQ9Y244 141 aa14.04□□□□□ -0.16
CD28-203ENST00000458610 SAMHD1Q9Y3Z3 626 aaKnown RBP14.04□□□□□ -0.16
CD28-203ENST00000458610 IER3IP1Q9Y5U9 82 aa14.04□□□□□ -0.16
CD28-203ENST00000458610 IQCMA0A1B0GVH7 501 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 PRSS37A4D1T9 235 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 OVOL3O00110 214 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 SLC2A10O95528 541 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 TXNDC12O95881 172 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 CST1P01037 141 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 SERPINA5P05154 406 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 GSTM3P21266 225 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 PTH2RP49190 550 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 ATP5J2P56134 94 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 PCBD1P61457 104 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 SGCAQ16586 387 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 FAM27BQ5VT28 67 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 PGBD2Q6P3X8 592 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 FAM122BQ7Z309 247 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 TGIF2LYQ8IUE0 185 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 ADGRG5Q8IZF4 528 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 NUP37Q8NFH4 326 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 OR52L1Q8NGH7 329 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 CANT1Q8WVQ1 401 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 PERPQ96FX8 193 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 SH3GL3Q99963 347 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 CADM1Q9BY67 442 aaKnown RBP14.03□□□□□ -0.16
CD28-203ENST00000458610 OR52D1Q9H346 318 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 SEC61A2Q9H9S3 476 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 ADAM18Q9Y3Q7 739 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 PMF1-BGLAPU3KQ54 211 aa14.03□□□□□ -0.16
CD28-203ENST00000458610 MYO9AB2RTY4 2548 aa14.02□□□□□ -0.16
CD28-203ENST00000458610 IGHV2OR16-5A0A0B4J2B6 119 aa14.02□□□□□ -0.17
CD28-203ENST00000458610 SLC22A23A1A5C7 686 aa14.02□□□□□ -0.17
CD28-203ENST00000458610 ZNF503-AS2A6NEH8 195 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms