RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 DECR1Q16698 335 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 LRRC36Q1X8D7 754 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 BEAN1Q3B7T3 259 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 ZNF311Q5JNZ3 666 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 OR2T5Q6IEZ7 315 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 TCTN3Q6NUS6 607 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 DHRS4L2Q6PKH6 230 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 HSDL2Q6YN16 418 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 SLC29A4Q7RTT9 530 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 HMGN2P46Q86SG4 172 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 COMTD1Q86VU5 262 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 CARM1Q86X55 608 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 VRK2Q86Y07 508 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 RBM45Q8IUH3 476 aaKnown RBP4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 MISPQ8IVT2 679 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 C9orf40Q8IXQ3 194 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 CLIP4Q8N3C7 705 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 BCORP1Q8N888 145 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 APCDD1LQ8NCL9 501 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 C17orf47Q8NEP4 570 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 STEAP2Q8NFT2 490 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 OR11G2Q8NGC1 345 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 OR4D11Q8NGI4 311 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 OR2T29Q8NH02 315 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 OR52P1PQ8NH57 321 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 PROX1Q92786 737 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 TMBIM1Q969X1 311 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 ZNF354BQ96LW1 612 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 ZNF300Q96RE9 604 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 LPAR4Q99677 370 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 SLC29A1Q99808 456 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 WFDC6Q9BQY6 131 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 BDH2Q9BUT1 245 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 PINK1Q9BXM7 581 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 WWTR1Q9GZV5 400 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 NXF5Q9H1B4 397 aaKnown RBP4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 PPP1R3EQ9H7J1 279 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 CDH20Q9HBT6 801 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 TMEM165Q9HC07 324 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 THSD1Q9NS62 852 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 SERTAD4Q9NUC0 356 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 VNN3Q9NY84 501 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 ZNF223Q9UK11 482 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 CNOT11Q9UKZ1 510 aaKnown RBP4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 ABCG2Q9UNQ0 655 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 B3GALT5Q9Y2C3 310 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 IFT52Q9Y366 437 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 OR10H1Q9Y4A9 318 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 LRRC42Q9Y546 428 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 HS3ST3B1Q9Y662 390 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 ENPP4Q9Y6X5 453 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 FREM3P0C091 2139 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 NCOR2Q9Y618 2525 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 CACNA1GO43497 2377 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 CACNA1AO00555 2505 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 IGHV1-45A0A0A0MS14 117 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 NPIPA5A0A0B4J1W7 369 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 TRBV11-1A0A0K0K1C0 115 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 CENPVL1A0A0U1RR11 272 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 LOC101059948A0A1B0GTJ6 334 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 LINC00854A0A1B0GVQ3 168 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 UNC119BA6NIH7 251 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 CLDN24A6NM45 220 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 C21orf140B9A014 251 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 NPIPA7E9PJI5 369 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 H0YJX3 145 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 STMND1H3BQB6 276 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 J3QR06 171 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 K7EQM0 130 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 PDLIM1O00151 329 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 GNGT2O14610 69 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 FFAR1O14842 300 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 TSPAN2O60636 221 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 RAD1O60671 282 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 TPST2O60704 377 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 PRAF2O60831 178 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 REM1O75628 298 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 UGT2B17O75795 530 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 ZFAND5O76080 213 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 NDUFB4O95168 129 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 IFNW1P05000 195 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 CSN3P07498 182 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 NPIPA8P0DM63 369 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 CLUP10909 449 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 COX6A1P12074 109 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 RPA2P15927 270 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 ATP6V1C1P21283 382 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 MPZP25189 248 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 CD82P27701 267 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 PCSK6P29122 969 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 RBMS1P29558 406 aaKnown RBP4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 LCN1P31025 176 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 DLSTP36957 453 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 DCTP40126 519 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 YAP1P46937 504 aaKnown RBP4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 RFX3P48380 749 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 NR0B1P51843 470 aaKnown RBP4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 HMGA2P52926 109 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 NUDT6P53370 316 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms