RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 LINC00336Q6ZUF6 198 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 RALGPS2Q86X27 583 aaPredicted RBP3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 FBXO16Q8IX29 292 aaPredicted RBP3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 JAGN1Q8N5M9 183 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 OR5K2Q8NHB8 316 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 LILRB4Q8NHJ6 448 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 CXorf40AQ8TE69 158 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 FCRL1Q96LA6 429 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 CSPG4P5Q96PW8 444 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 KCTD14Q9BQ13 255 aaPredicted RBP3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 DEFB127Q9H1M4 99 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 OR51J1Q9H342 316 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 IL26Q9NPH9 171 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 CCDC59Q9P031 241 aaKnown RBP3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 ZMAT5Q9UDW3 170 aaKnown RBP3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 CSAG2Q9Y5P2 127 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 A0A1B0GVI7 797 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 TMEM120BA0PK00 339 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 C12orf71A8MTZ7 269 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 F6UB75 175 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 SCAMP2O15127 329 aaKnown RBP3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 NVLO15381 856 aaKnown RBP3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 RNF224P0DH78 156 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 GPX4P36969 197 aaPredicted RBP3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 CCR8P51685 355 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 APOC4P55056 127 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 ADARB1P78563 741 aaKnown RBP3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 ECH1Q13011 328 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 ZNF726P1Q15940 193 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 LPAL2Q16609 132 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 PGGHGQ32M88 737 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 TCTEX1D4Q5JR98 221 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 ZNF658Q5TYW1 1059 aaPredicted RBP3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 GFI1BQ5VTD9 330 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 GPR107Q5VW38 600 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 SPESP1Q6UW49 350 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 TFAP2EQ6VUC0 442 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 CMC1Q7Z7K0 106 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 ASCC1Q8N9N2 400 aaKnown RBP3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 SPERTQ8NA61 448 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 DRAXINQ8NBI3 349 aaPredicted RBP3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 FBXO36Q8NEA4 188 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 OR5T3Q8NGG3 340 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 CACNG8Q8WXS5 425 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 ECHDC3Q96DC8 303 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 JSRP1Q96MG2 331 aaPredicted RBP3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 NAA50Q9GZZ1 169 aaKnown RBP3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 SRMSQ9H3Y6 488 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 ZDHHC11Q9H8X9 412 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 EXD2Q9NVH0 621 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 MARCH5Q9NX47 278 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 TMEM9Q9P0T7 183 aa3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 BZW2Q9Y6E2 419 aaKnown RBP3.05□□□□□ -1.92
HMGN3P1-201ENST00000453847 ADGRA3Q8IWK6 1321 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 IGKV3D-15A0A087WSY6 115 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 LOC100506127A0A0U1RQW1 187 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 A0A1W2PRD5 423 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 K7EMT4 169 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 RRP8O43159 456 aaKnown RBP3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 GMDSO60547 372 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 NPPAP01160 153 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 CHTF8P0CG12 524 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 LCN1P31025 176 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 FMO3P31513 532 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 TNFSF9P41273 254 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 SERPINB8P50452 374 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 CCNG1P51959 295 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 SUB1P53999 127 aaKnown RBP eCLIP3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 ATP6V0D1P61421 351 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 RCAN2Q14206 197 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 KIAA0040Q15053 153 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 NCF4Q15080 339 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 SF3A2Q15428 464 aaKnown RBP3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 GABRA6Q16445 453 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 KCTD19Q17RG1 926 aaPredicted RBP3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 C15orf32Q32M92 178 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 TRMT5Q32P41 509 aaKnown RBP3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 Q3ZCU0 254 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 CASC10Q5T4H9 136 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 TTC23LQ6PF05 361 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 ZNF525Q8N782 197 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 ZFP41Q8N8Y5 198 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 ZNF740Q8NDX6 193 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 OR2AP1Q8NGE2 309 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 OR10R2Q8NGX6 335 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 MRAPQ8TCY5 172 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 C9orf72Q96LT7 481 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 TSSK3Q96PN8 268 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 EBF4Q9BQW3 602 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 TMEM175Q9BSA9 504 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 CNPY3Q9BT09 278 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 OSBPL10Q9BXB5 764 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 HES7Q9BYE0 225 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 KRTAP1-5Q9BYS1 174 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 GAL3ST2Q9H3Q3 398 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 PIGUQ9H490 435 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 PTGES2Q9H7Z7 377 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 ISG20L2Q9H9L3 353 aaKnown RBP3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 MRPL47Q9HD33 250 aaKnown RBP3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 DYRK4Q9NR20 520 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms