RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 HIST3H3Q16695 136 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 THEM4Q5T1C6 240 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 C10orf128Q5T292 105 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 ANKRD16Q6P6B7 361 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 DNM1P34Q6PK57 102 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 KLHL24Q6TFL4 600 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 MEX3BQ6ZN04 569 aaKnown RBP7.66□□□□□ -1.18
COL28A1-205ENST00000453441 FAM122BQ7Z309 247 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 PQLC1Q8N2U9 271 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 ZNF433Q8N7K0 673 aaPredicted RBP7.66□□□□□ -1.18
COL28A1-205ENST00000453441 OR2T33Q8NG76 320 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 TEX47Q8TBZ9 253 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 LRTOMTQ8WZ04 291 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 MUCL1Q96DR8 90 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 MUS81Q96NY9 551 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 ALKBH3Q96Q83 286 aaPredicted RBP7.66□□□□□ -1.18
COL28A1-205ENST00000453441 TSPAN32Q96QS1 320 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 GPA33Q99795 319 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 RBM4BQ9BQ04 359 aaKnown RBP7.66□□□□□ -1.18
COL28A1-205ENST00000453441 IFT27Q9BW83 186 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 RBM4Q9BWF3 364 aaKnown RBP7.66□□□□□ -1.18
COL28A1-205ENST00000453441 MRPL13Q9BYD1 178 aaKnown RBP7.66□□□□□ -1.18
COL28A1-205ENST00000453441 PRRG3Q9BZD7 231 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 ACTR6Q9GZN1 396 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 GPR35Q9HC97 309 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 PAPOLBQ9NRJ5 636 aaKnown RBP7.66□□□□□ -1.18
COL28A1-205ENST00000453441 TBC1D23Q9NUY8 699 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 FBXL3Q9UKT7 428 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 ZNF346Q9UL40 294 aaKnown RBP7.66□□□□□ -1.18
COL28A1-205ENST00000453441 ARPC4-TTLL3A0A0A6YYG9 625 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 PRSS37A4D1T9 235 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 SH3D21A4FU49 640 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 OR5H1A6NKK0 313 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 M0R3G1 203 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 DHHO43323 396 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 UPK3AO75631 287 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 FARS2O95363 451 aaKnown RBP7.65□□□□□ -1.18
COL28A1-205ENST00000453441 WNT11O96014 354 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 RENP00797 406 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 IFNGP01579 166 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 IGHV3-9P01782 118 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 ITGA5P08648 1049 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 ZNF26P17031 533 aaPredicted RBP7.65□□□□□ -1.18
COL28A1-205ENST00000453441 NPR2P20594 1047 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 CRABP1P29762 137 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 CCKARP32238 428 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 GRK5P34947 590 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 GUCA1AP43080 201 aaPredicted RBP7.65□□□□□ -1.18
COL28A1-205ENST00000453441 FXYD6P3P58550 94 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 ERVK-25P63136 954 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 PPP1R8Q12972 351 aaKnown RBP7.65□□□□□ -1.18
COL28A1-205ENST00000453441 TOP3AQ13472 1001 aaPredicted RBP7.65□□□□□ -1.18
COL28A1-205ENST00000453441 MELKQ14680 651 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 DAZAP2Q15038 168 aaPredicted RBP7.65□□□□□ -1.18
COL28A1-205ENST00000453441 GABRA6Q16445 453 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 CARD17Q5XLA6 110 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 SP5Q6BEB4 398 aaPredicted RBP7.65□□□□□ -1.18
COL28A1-205ENST00000453441 SLC27A4Q6P1M0 643 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 KLHL17Q6TDP4 642 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 TMEM179BQ7Z7N9 219 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 JAZF1Q86VZ6 243 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 MEX3DQ86XN8 651 aaKnown RBP7.65□□□□□ -1.18
COL28A1-205ENST00000453441 LNX2Q8N448 690 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 OR1K1Q8NGR3 316 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 S100PBPQ96BU1 408 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 NMD3Q96D46 503 aaKnown RBP7.65□□□□□ -1.18
COL28A1-205ENST00000453441 C14orf79Q96F83 325 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 SAMD8Q96LT4 415 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 Q96M85 177 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 ERMAPQ96PL5 475 aaPredicted RBP7.65□□□□□ -1.18
COL28A1-205ENST00000453441 PKP2Q99959 881 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 WACQ9BTA9 647 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 MED18Q9BUE0 208 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 C9orf16Q9BUW7 83 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 EMC6Q9BV81 110 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 CRLF2Q9HC73 371 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 VSX1Q9NZR4 365 aaPredicted RBP7.65□□□□□ -1.18
COL28A1-205ENST00000453441 KLHL21Q9UJP4 597 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 ORC6Q9Y5N6 252 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 IER3IP1Q9Y5U9 82 aa7.65□□□□□ -1.18
COL28A1-205ENST00000453441 TEX13CA0A0J9YWL9 993 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 SLC22A23A1A5C7 686 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 RIIAD1A6NNX1 92 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 H3BN98 237 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 C19orf84I3L1E1 186 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 BHLHE40O14503 412 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 ARHGEF9O43307 516 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 RAD51DO75771 328 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 LYZL6O75951 148 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 PPP1R3DO95685 299 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 HMGN1P05114 100 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 QDPRP09417 244 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 FSTP19883 344 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 EDNRAP25101 427 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 SSTR2P30874 369 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 CENPAP49450 140 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 BLVRAP53004 296 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 RAD23AP54725 363 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 NR1H2P55055 460 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 UBE2NP61088 152 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms