RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 RPS7P62081 194 aaKnown RBP17.06■□□□□ 0.32
RPS28-202ENST00000449223 GLO1Q04760 184 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 DBPQ10586 325 aaPredicted RBP17.06■□□□□ 0.32
RPS28-202ENST00000449223 STK11Q15831 433 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 GFRALQ6UXV0 394 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 P4HA3Q7Z4N8 544 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 OR52I1Q8NGK6 324 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 MCHR2Q969V1 340 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 ZFP3Q96NJ6 502 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 CDCA4Q9BXL8 241 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 TP63Q9H3D4 680 aaPredicted RBP17.06■□□□□ 0.32
RPS28-202ENST00000449223 ADGRL4Q9HBW9 690 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 DIMT1Q9UNQ2 313 aaKnown RBP17.06■□□□□ 0.32
RPS28-202ENST00000449223 EPG5Q9HCE0 2579 aa17.05■□□□□ 0.32
RPS28-202ENST00000449223 IGKV1D-43A0A0B4J1Z2 117 aa17.05■□□□□ 0.32
RPS28-202ENST00000449223 PRRG2O14669 202 aa17.05■□□□□ 0.32
RPS28-202ENST00000449223 SLC19A2O60779 497 aa17.05■□□□□ 0.32
RPS28-202ENST00000449223 KHDRBS3O75525 346 aaKnown RBP17.05■□□□□ 0.32
RPS28-202ENST00000449223 HRGP04196 525 aa17.05■□□□□ 0.32
RPS28-202ENST00000449223 PYCR1P32322 319 aa17.05■□□□□ 0.32
RPS28-202ENST00000449223 TIMP3P35625 211 aa17.05■□□□□ 0.32
RPS28-202ENST00000449223 RBPJQ06330 500 aa17.05■□□□□ 0.32
RPS28-202ENST00000449223 EIF2S3LQ2VIR3 472 aaKnown RBP17.05■□□□□ 0.32
RPS28-202ENST00000449223 C1orf185Q5T7R7 199 aa17.05■□□□□ 0.32
RPS28-202ENST00000449223 SEM1Q6ZVN7 128 aa17.05■□□□□ 0.32
RPS28-202ENST00000449223 FAM214BQ7L5A3 538 aa17.05■□□□□ 0.32
RPS28-202ENST00000449223 ST6GALNAC3Q8NDV1 305 aa17.05■□□□□ 0.32
RPS28-202ENST00000449223 OR51L1Q8NGJ5 315 aa17.05■□□□□ 0.32
RPS28-202ENST00000449223 OR6K6Q8NGW6 343 aa17.05■□□□□ 0.32
RPS28-202ENST00000449223 ZNF775Q96BV0 537 aaPredicted RBP17.05■□□□□ 0.32
RPS28-202ENST00000449223 TMEM80Q96HE8 168 aa17.05■□□□□ 0.32
RPS28-202ENST00000449223 CRHP06850 196 aa17.04■□□□□ 0.32
RPS28-202ENST00000449223 QDPRP09417 244 aa17.04■□□□□ 0.32
RPS28-202ENST00000449223 GAAP10253 952 aa17.04■□□□□ 0.32
RPS28-202ENST00000449223 CDH15P55291 814 aa17.04■□□□□ 0.32
RPS28-202ENST00000449223 CARD17Q5XLA6 110 aa17.04■□□□□ 0.32
RPS28-202ENST00000449223 RPTNQ6XPR3 784 aa17.04■□□□□ 0.32
RPS28-202ENST00000449223 FOXL2NBQ6ZUU3 175 aa17.04■□□□□ 0.32
RPS28-202ENST00000449223 TIGD4Q8IY51 512 aa17.04■□□□□ 0.32
RPS28-202ENST00000449223 STX19Q8N4C7 294 aa17.04■□□□□ 0.32
RPS28-202ENST00000449223 C9orf106Q8NAJ2 232 aa17.04■□□□□ 0.32
RPS28-202ENST00000449223 OR51G2Q8NGK0 314 aa17.04■□□□□ 0.32
RPS28-202ENST00000449223 OR6N1Q8NGY5 312 aa17.04■□□□□ 0.32
RPS28-202ENST00000449223 CPT1CQ8TCG5 803 aa17.04■□□□□ 0.32
RPS28-202ENST00000449223 ZMYND19Q96E35 227 aaPredicted RBP17.04■□□□□ 0.32
RPS28-202ENST00000449223 CNN2Q99439 309 aaKnown RBP17.04■□□□□ 0.32
RPS28-202ENST00000449223 SLCO5A1Q9H2Y9 848 aa17.04■□□□□ 0.32
RPS28-202ENST00000449223 ERVK-18Q9QC07 812 aa17.04■□□□□ 0.32
RPS28-202ENST00000449223 CLEC4AQ9UMR7 237 aa17.04■□□□□ 0.32
RPS28-202ENST00000449223 PHF3Q92576 2039 aaKnown RBP17.03■□□□□ 0.32
RPS28-202ENST00000449223 RPL36A-HNRNPH2H7BZ11 118 aa17.03■□□□□ 0.32
RPS28-202ENST00000449223 ATXN7O15265 892 aaPredicted RBP17.03■□□□□ 0.32
RPS28-202ENST00000449223 KALRNO60229 2985 aa17.03■□□□□ 0.32
RPS28-202ENST00000449223 RAB36O95755 333 aa17.03■□□□□ 0.32
RPS28-202ENST00000449223 STSP08842 583 aa17.03■□□□□ 0.32
RPS28-202ENST00000449223 C21orf33P30042 268 aaPredicted RBP17.03■□□□□ 0.32
RPS28-202ENST00000449223 MVKQ03426 396 aa17.03■□□□□ 0.32
RPS28-202ENST00000449223 HSF2Q03933 536 aa17.03■□□□□ 0.32
RPS28-202ENST00000449223 IRF3Q14653 427 aa17.03■□□□□ 0.32
RPS28-202ENST00000449223 ETFDHQ16134 617 aa17.03■□□□□ 0.32
RPS28-202ENST00000449223 PHYHD1Q5SRE7 291 aa17.03■□□□□ 0.32
RPS28-202ENST00000449223 B3GLCTQ6Y288 498 aa17.03■□□□□ 0.32
RPS28-202ENST00000449223 GLB1L2Q8IW92 636 aa17.03■□□□□ 0.32
RPS28-202ENST00000449223 SPARTQ8N0X7 666 aa17.03■□□□□ 0.32
RPS28-202ENST00000449223 SLC26A10Q8NG04 563 aa17.03■□□□□ 0.32
RPS28-202ENST00000449223 OR4F15Q8NGB8 312 aa17.03■□□□□ 0.32
RPS28-202ENST00000449223 MRPS26Q9BYN8 205 aaKnown RBP17.03■□□□□ 0.32
RPS28-202ENST00000449223 INPP5EQ9NRR6 644 aa17.03■□□□□ 0.32
RPS28-202ENST00000449223 COA3Q9Y2R0 106 aaPredicted RBP17.03■□□□□ 0.32
RPS28-202ENST00000449223 FREM1Q5H8C1 2179 aa17.03■□□□□ 0.32
RPS28-202ENST00000449223 ADRA2AP08913 450 aa17.02■□□□□ 0.32
RPS28-202ENST00000449223 OR3A2P47893 321 aa17.02■□□□□ 0.32
RPS28-202ENST00000449223 PCK2Q16822 640 aa17.02■□□□□ 0.32
RPS28-202ENST00000449223 NUFIP2Q7Z417 695 aaKnown RBP17.02■□□□□ 0.32
RPS28-202ENST00000449223 DOLPP1Q86YN1 238 aa17.02■□□□□ 0.32
RPS28-202ENST00000449223 APH1AQ96BI3 265 aa17.02■□□□□ 0.32
RPS28-202ENST00000449223 MNTQ99583 582 aa17.02■□□□□ 0.32
RPS28-202ENST00000449223 ZNF649Q9BS31 505 aa17.02■□□□□ 0.32
RPS28-202ENST00000449223 ULBP2Q9BZM5 246 aa17.02■□□□□ 0.32
RPS28-202ENST00000449223 B3GAT2Q9NPZ5 323 aa17.02■□□□□ 0.32
RPS28-202ENST00000449223 MRPL22Q9NWU5 206 aaKnown RBP17.02■□□□□ 0.32
RPS28-202ENST00000449223 MALT1Q9UDY8 824 aa17.02■□□□□ 0.32
RPS28-202ENST00000449223 SCOCQ9UIL1 159 aa17.02■□□□□ 0.32
RPS28-202ENST00000449223 EXOSC1Q9Y3B2 195 aaKnown RBP17.02■□□□□ 0.32
RPS28-202ENST00000449223 UGT2A1Q9Y4X1 527 aa17.02■□□□□ 0.32
RPS28-202ENST00000449223 COMMD3-BMI1R4GMX3 469 aa17.02■□□□□ 0.32
RPS28-202ENST00000449223 POLEQ07864 2286 aa17.02■□□□□ 0.31
RPS28-202ENST00000449223 RP1L1Q8IWN7 2480 aaPredicted RBP17.02■□□□□ 0.31
RPS28-202ENST00000449223 CACNA1BQ00975 2339 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 FAM171A2A8MVW0 826 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 DHHO43323 396 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 UPK3AO75631 287 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 TOXO94900 526 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 TFP02787 698 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 MT-ND2P03891 347 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 OR2T7P0C7T2 308 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 PCMT1P22061 227 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 LAP3P28838 519 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 CEACAM8P31997 349 aaPredicted RBP17.01■□□□□ 0.31
RPS28-202ENST00000449223 ACTC1P68032 377 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms