RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 MED25Q71SY5 747 aa17.27■□□□□ 0.35
SDCBP-204ENST00000447182 PHOSPHO1Q8TCT1 267 aa17.27■□□□□ 0.35
SDCBP-204ENST00000447182 KTI12Q96EK9 354 aaPredicted RBP17.27■□□□□ 0.35
SDCBP-204ENST00000447182 MRGPRX1Q96LB2 322 aa17.27■□□□□ 0.35
SDCBP-204ENST00000447182 ULBP3Q9BZM4 244 aa17.27■□□□□ 0.35
SDCBP-204ENST00000447182 C12orf4Q9NQ89 552 aa17.27■□□□□ 0.35
SDCBP-204ENST00000447182 DNAH14Q0VDD8 3507 aa17.27■□□□□ 0.35
SDCBP-204ENST00000447182 TRANK1O15050 2925 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 H3BUI4 141 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 SULT1C2O00338 296 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 KDM4BO94953 1096 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 CD3DP04234 171 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 PROS1P07225 676 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 CA3P07451 260 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 HPGDP15428 266 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 GALNSP34059 522 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 CCR4P51679 360 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 ACTBP60709 375 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 UBE2MP61081 183 aaKnown RBP17.26■□□□□ 0.35
SDCBP-204ENST00000447182 ACTG1P63261 375 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 EIF2B5Q13144 721 aaKnown RBP17.26■□□□□ 0.35
SDCBP-204ENST00000447182 ERV3-1Q14264 604 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 FAM122CQ6P4D5 195 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 TSEN15Q8WW01 171 aaKnown RBP17.26■□□□□ 0.35
SDCBP-204ENST00000447182 LMF1Q96S06 567 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 SYT4Q9H2B2 425 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 LDAHQ9H6V9 325 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 TMEM138Q9NPI0 162 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 HS3ST3A1Q9Y663 406 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 F5P12259 2224 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 RFPL4AA6NLU0 287 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 RFPL4AL1F8VTS6 287 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 ZNF264O43296 627 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 PMS2P2O95744 297 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 MAOAP21397 527 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 RPS27P42677 84 aaKnown RBP17.26■□□□□ 0.35
SDCBP-204ENST00000447182 ARMC6Q6NXE6 501 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 ZNF761Q86XN6 746 aaPredicted RBP17.26■□□□□ 0.35
SDCBP-204ENST00000447182 AVL9Q8NBF6 648 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 CCDC107Q8WV48 283 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 OR8B4Q96RC9 309 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 DMRTA2Q96SC8 542 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 AMELYQ99218 206 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 AIFM2Q9BRQ8 373 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 TCEAL2Q9H3H9 227 aaPredicted RBP17.26■□□□□ 0.35
SDCBP-204ENST00000447182 EXO5Q9H790 373 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 UPB1Q9UBR1 384 aa17.26■□□□□ 0.35
SDCBP-204ENST00000447182 SCDO00767 359 aa17.25■□□□□ 0.35
SDCBP-204ENST00000447182 NSA2O95478 260 aaKnown RBP17.25■□□□□ 0.35
SDCBP-204ENST00000447182 IL33O95760 270 aa17.25■□□□□ 0.35
SDCBP-204ENST00000447182 HSD17B7P56937 341 aa17.25■□□□□ 0.35
SDCBP-204ENST00000447182 ZNF273Q14593 569 aa17.25■□□□□ 0.35
SDCBP-204ENST00000447182 ODF4Q2M2E3 257 aa17.25■□□□□ 0.35
SDCBP-204ENST00000447182 C4orf46Q504U0 113 aa17.25■□□□□ 0.35
SDCBP-204ENST00000447182 TEX30Q5JUR7 227 aa17.25■□□□□ 0.35
SDCBP-204ENST00000447182 GABRG1Q8N1C3 465 aa17.25■□□□□ 0.35
SDCBP-204ENST00000447182 ASB17Q8WXJ9 295 aa17.25■□□□□ 0.35
SDCBP-204ENST00000447182 EDAQ92838 391 aa17.25■□□□□ 0.35
SDCBP-204ENST00000447182 TAAR8Q969N4 342 aa17.25■□□□□ 0.35
SDCBP-204ENST00000447182 CHST6Q9GZX3 395 aa17.25■□□□□ 0.35
SDCBP-204ENST00000447182 MFFQ9GZY8 342 aa17.25■□□□□ 0.35
SDCBP-204ENST00000447182 ADAM19Q9H013 955 aa17.25■□□□□ 0.35
SDCBP-204ENST00000447182 MYOZ1Q9NP98 299 aaPredicted RBP17.25■□□□□ 0.35
SDCBP-204ENST00000447182 EPHA6Q9UF33 1036 aa17.25■□□□□ 0.35
SDCBP-204ENST00000447182 KCNG2Q9UJ96 466 aa17.25■□□□□ 0.35
SDCBP-204ENST00000447182 CACNA1IQ9P0X4 2223 aa17.25■□□□□ 0.35
SDCBP-204ENST00000447182 OR2W5A6NFC9 320 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 SDC3O75056 442 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 HPP00738 406 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 CCKBRP32239 447 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 MAZP56270 477 aaKnown RBP17.24■□□□□ 0.35
SDCBP-204ENST00000447182 TAS2R19P59542 299 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 SLC17A1Q14916 467 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 COL13A1Q5TAT6 717 aaPredicted RBP17.24■□□□□ 0.35
SDCBP-204ENST00000447182 C11orf88Q6PI97 169 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 TAF8Q7Z7C8 310 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 ZNF524Q96C55 264 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 SLC25A21Q9BQT8 299 aaPredicted RBP17.24■□□□□ 0.35
SDCBP-204ENST00000447182 POTEKPQ9BYX7 375 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 A0A0C4DFX4 3053 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 D6RAR5 112 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 SORDQ00796 357 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 HHEXQ03014 270 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 ASPHD2Q6ICH7 369 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 LRRC69Q6ZNQ3 347 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 PM20D2Q8IYS1 436 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 SLC22A18ASQ8N1D0 253 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 ZNF454Q8N9F8 522 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 TMEM229BQ8NBD8 167 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 OR13H1Q8NG92 308 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 SLC25A28Q96A46 364 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 PELOQ9BRX2 385 aaKnown RBP17.24■□□□□ 0.35
SDCBP-204ENST00000447182 SLC25A32Q9H2D1 315 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 POFUT1Q9H488 388 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 ELOVL3Q9HB03 270 aa17.24■□□□□ 0.35
SDCBP-204ENST00000447182 LGALS8O00214 317 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 GPANK1O95872 356 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 CELA2BP08218 269 aaPredicted RBP17.23■□□□□ 0.35
SDCBP-204ENST00000447182 CD37P11049 281 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 TACR3P29371 465 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms